KEGG   Solanum lycopersicum (tomato): 101253976
Entry
101253976         CDS       T02665                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101253976
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sly04121]
    101253976
Enzymes [BR:sly01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101253976
Ubiquitin system [BR:sly04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101253976
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_UBOX RING_XB3-XBAT31 zf-C3HC4_2 zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_2 U-box Prok-RING_4 PTR3_N zf-rbx1
Other DBs
NCBI-GeneID: 101253976
NCBI-ProteinID: XP_004251789
UniProt: A0A3Q7J469
LinkDB
Position
12:4021950..4022772
AA seq 224 aa
MALEQIFQDQIVEFDQRDNSFEKWKTSNLDKLEENSPQGFECNICLDLVHDPVVTLCGHL
YCWPCIYKWIHYNALSSENIDNKQPKCPVCKAEVSQKTLIPLYGRGQATKTSTKAMSLGL
VIPQRPPSPRCTSHGLIDNNNISPLSHDDHRNHITLEHMLSPGGTTTGEIVYARMFGNSL
NTDSYTYSSSYSPRLRRQLLQTDQSLSRICFFLCCCLVTCLLLF
NT seq 675 nt   +upstreamnt  +downstreamnt
atggccttagaacaaatttttcaagaccaaatagtggaatttgatcaacgcgataattct
tttgaaaaatggaagacaagcaatctcgataaacttgaagaaaattcacctcaaggtttc
gagtgcaacatttgtctagatcttgtgcatgatcctgttgttacattatgtggtcacctc
tattgttggccttgtatctacaaatggatacattataacgccttatcatctgaaaacatc
gataacaaacagccaaaatgccctgtttgcaaagctgaagtctcacaaaaaacattgatt
ccactctatggccgcggtcaagctacaaaaacatcaaccaaggccatgagtcttggtcta
gtcataccacaaagacctcctagtccgagatgtacgagtcacggactaatagataataat
aatatttctcctttatctcatgatgatcatcgaaatcatataactttagaacatatgcta
agtcctggtggcacgacaacaggggaaattgtttatgcacgaatgtttgggaactcattg
aatactgattcgtatacatattcgagttcatacagtccaaggttaagaagacaactatta
caaacggatcaatcacttagcagaatctgttttttcctatgttgttgtttagtaacatgt
cttctcttgttttga

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