Solanum lycopersicum (tomato): 101254121
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Entry
101254121 CDS
T02665
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sly01001
]
101254121
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101254121
Enzymes [BR:
sly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101254121
Protein kinases [BR:
sly01001
]
Serine/threonine kinases: Other
Other
101254121
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101254121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
LisH
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
LisH_PAC1
Beta-prop_VPS8
EIF3I
Motif
Other DBs
NCBI-GeneID:
101254121
NCBI-ProteinID:
XP_010325659
LinkDB
All DBs
Position
8:complement(60637693..60651534)
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AA seq
1970 aa
AA seq
DB search
MEEEPQQQQSLAAEGEEERQTETVPTEEHEEEEGEEAGGGEEDEEEAESEGLIIKAQALM
EKITALPDNPNPNTIHALSSLFETQEASYMEENGHAAPNNGRSSHNVGRLGNLIRDNDEF
FELISSKFLTERRYSVSVKAAAARLLFSCSLTWMYPHVFEDPVLENLKSWTTDDTIRLSG
DDHYWKHESGDRRSSDSEMLKTYSTGLLAVCLASGGQVVEDVLTSGLPAKLMHYLRIRIL
GETTTSQRDATSLLDGKASSTGTGVRAREECRSRFRQVAESSHLDIPRVAEDGLHGDQIL
DKDRDRSASRHMHGDERWTDEEPPDSMAMDDDNCQADGDGEERWHIRDLRDGKAKPGNRS
VREDEYDESARDELSRRRVNRGWTRHRGRGRVTEGVPDNEAALTSPGSASRLSGQSRSRN
LNRNQELRRAPDNKKNLSRTNVDGFGMERDENDECFRECKVGSKDITDLVKKAVGAAETE
AKTANAPAEAVKAAGDAAAEVVKSAAFEEFKKSNDDEAAVLAASKAASTVIDAAIAVEVS
RSAISEGESQDIKATAQEANEDVDEFFILDSDSLAKLREKFCIQCLIILGEYVEVLGPVL
HEKGVDVCIGLLQRNSKHKEGCRLSLLLPDVLKLICALAAHRKFAAVFVDRGGMQKLLAA
PRAPQTFCGLSSCLFAIGSIQGIMERVCTLPSSIIHQVVELALQLLECPQDLARKNSALF
FAASFVFRAVVDAFDAQDGLQKMLNLLQDAALVRSGASSGALTASGSLRSDRSPPEVLTA
SEKQIAYHTCVALRQYFRAHLLLLVDSIRPNKSVRSAGRNIPSVRAASKPLDISNEAMDA
VSRLIQKDRRLGPAAVRARWPVVDKFLNCNGHITMLELCQAPPVERYLHDLLQYALGVLH
IVTLVPYSRKLIVNATLSNDRVGIAVILDAANSAGYVEPEIVEAALNVLVCLVCPPPSIS
NKPSVSTQAQQTNAVQSANTPGVETRDRNADRSETRDRNAERILPDRAVNISSQNENRES
TLPDRGSTAVPGTSAVSGTSQGPVSTVTSGLVGDRRISLGAGAGCAGLAAQLEQCYRQAR
EAVRANNGIKVLLQLLQPRIVTPPAAIDCLRALACRVLLGLARDDTIAHILTKLQVGKKL
SELIRDSGNQTPGSEQNRWQAELAQVAIELIGVVTNSGRASSLAATDAATPTLRRIERAA
IAAATPITYHARELLLLIHEHLQASGLTDTATMLLKEAQLTPLPSLAAPSSLAHQTSGQE
TSSVQIQWPSGRAPRGFLSAKPKLPPLDEDGGLKSESIVCSSRRKPLAFSSARSLSSKSF
PVEVSPSTSGCKFSNSRKCATPIATSETPLLSTVKAGGDPDIMFKTPIVLPMKRKLTDLK
ESGSVSSVKRLNTGEHTVRSPVCVTPNSFRRSGLPSDTNVPSTPNSTLREIHNRPGSSAF
PTEGDDTPMLSSSQHGLLSDTQPSNAERLTLDSLVVQYLKHQHRQCPAPITTLPPLSLLH
PHVCPEPKRSLDAPSNVTSRLSTRDFRSLNGGTHGKRKDRQFVYSRFRPWRTCRDDAGVL
LTCVSFMGDSSQIAAGTHSGELKIFDTNSSSILESFTSHQAPLTLLQSYLSVETQLLLSS
SSHDVRLWDATSVSAGPKHSFEGCKAARFSNFGTTFAALSAEQSRREILLYDTQTCQVEL
KLTDTSNIPSGRGHMYSLAHFSPSDNMLLWNGVLWDTRGSGPIHRFDQFTDYGGGGFHPA
GNEVIINSEVWDLRNFRLLRSVPSLDQTVITFNASGDVIYAILRRNLEDVMSAFQTRRVK
HPLFAAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSFVGLVTMDDQDEMYSSARVYEIG
RRRPTEDDSDPDDAESEDEDEDDDDDIDEEAILGTDLDGDGESDADDLSNDDDSVSELDD
EEDEDGDFIVDGVDFGGGGILEIVTDGEDEDDSELVESFSSGDDDDDDLL
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggagccgcaacaacaacaatcattggcggcggaaggggaggaggagcggcag
acggagacggttcctacggaggagcatgaggaggaagaaggagaagaagcgggaggtgga
gaggaagatgaagaagaggcggaaagtgaagggttgatcattaaggcacaagcgttgatg
gagaagattactgctttgcctgataaccctaaccccaatactatccatgctctttcttct
ctttttgaaacccaagaagctagttacatggaagagaatggtcatgctgctcctaataat
ggccgatcttcccataatgttggacggctagggaaccttatccgggacaatgatgaattc
tttgaactgatatcttcgaagttcctaactgagaggagatattcagtttctgtgaaggct
gctgctgcaaggctgctttttagctgttcactgacatggatgtatccacatgtttttgaa
gaccctgtgcttgaaaatttaaaaagctggacaacggacgacacaatcagattatctggt
gatgatcattattggaagcatgagtcaggtgatcggaggtcctccgattctgagatgctg
aagacctactctactggacttcttgctgtatgtttggcaagtggtggtcaagtagtcgaa
gatgtattaacatctgggctcccagcaaaactcatgcactatcttcggattagaatttta
ggggagaccaccacaagccaaagagatgcaacatctttgttggatggcaaagcatcatct
acaggtactggtgtgagagctagagaggaatgtagaagtagattccggcaagttgccgaa
agttctcatttagatatacccagagtagcggaagatggacttcatggtgatcaaattctg
gataaggatcgcgatagaagtgccagtaggcatatgcatggggatgaacgttggacagat
gaagagccacctgattctatggctatggatgatgataattgtcaggcagatggagatggc
gaagaaagatggcatattagagatttacgtgacggaaaggcaaagcctggtaacagatcc
gtaagggaagacgaatatgatgagagtgctagagatgagttgtcaagacgcagggtgaat
cgtgggtggacaagacacagaggacggggaagggtgactgagggtgttccggataatgaa
gcagctttgacctctccagggtctgctagtagattgagtgggcaatctcgcagtagaaat
ttaaaccggaatcaagagttgagaagagcacctgataacaagaagaatttgagtaggaca
aatgttgatggttttgggatggagagggatgaaaatgatgaatgtttccgagaatgtaaa
gtcggctccaaggatatcacagatctagtgaagaaagctgttggagctgctgaaacagaa
gcaaaaacagctaatgctccagcggaagctgttaaagcagcaggcgatgctgctgcagaa
gtagtcaagagtgctgcttttgaggaatttaagaagtcaaatgatgatgaggctgcagtt
ttggctgcttcaaaagctgcatctacagtcattgatgctgctattgctgttgaagtttca
aggagtgctatttctgaaggtgaatcacaagacataaaagcaacagctcaagaagcaaat
gaagatgttgatgaattcttcattctggatagtgactctcttgcaaagttgcgagagaag
ttctgcatccagtgtcttattattttgggagagtatgttgaagttcttggtcctgtattg
cacgaaaaaggagtcgacgtgtgtattgggctactgcaacgtaattccaagcataaagag
gggtgcagactttcacttcttttgcctgatgttctgaagctgatctgtgctttggctgca
catcggaaatttgctgcagtatttgtggatcgtggcggcatgcaaaaattgcttgctgcc
ccaagagctcctcagactttttgtggcctttcttcatgcttattcgctattgggtcaatt
cagggaataatggaacgtgtttgcactcttccttcaagcattatacatcaggtggttgag
ttggcgcttcagcttcttgaatgtcctcaagatctagccagaaaaaattctgccttgttt
tttgcggcttcatttgttttcagagctgtcgtagatgcttttgatgctcaggatggttta
cagaaaatgcttaatctcttgcaagatgctgcattagtgaggtctggagcttcttcgggg
gcattaactgcttcagggtcattacggagtgacagatcaccaccagaggttctgactgct
tctgagaagcagatagcatatcacacatgtgtcgcacttcgacagtacttcagagcacat
cttctcttgctggtggattcaattcgtcctaataaaagtgttcgcagtgctggacgaaat
atcccaagtgttcgggctgcatctaagcctcttgacattagtaatgaggctatggatgca
gtttcccgtttaatccagaaagatcggagacttggtcctgcagctgttagagcccgctgg
cctgtagttgacaagtttttaaattgcaatgggcatattacaatgttggaattgtgtcag
gctccacctgttgagcgttatttgcacgacttgcttcagtatgctcttggtgtacttcat
atcgtcactttagtaccttacagccgtaaacttattgttaatgcaacattaagcaatgat
cgtgtgggtatagctgttatattggatgcagctaacagtgccggttatgtagaacctgag
attgttgaagcagcattgaacgtgttagtttgtcttgtatgtcctccaccttcaatcagc
aataaaccatctgtatctacacaagcacagcaaaccaatgctgtccaatctgcaaacact
cctggtgtggagaccagagaccggaatgcagaccggagtgagaccagagacagaaatgca
gagcggattcttccagatcgagctgttaatatctccagtcagaatgaaaatagagaatct
actttaccagatcgtggaagcacagcagttcctggcacatctgcggtcagtggcacttct
caagggcccgtgtctacagtgacatcaggattagttggagaccgaagaatatcactaggt
gcaggagctggttgtgctggccttgctgctcaacttgaacaatgttaccgtcaagcgaga
gaagctgttagggcaaacaatggtattaaggtcctcctgcagctcctccagccacggata
gttactcctccagctgcaattgactgtcttcgtgctcttgcttgccgagtacttcttggt
ttggctagagatgatacaattgcacatatattaacaaaacttcaggttgggaagaagttg
tcagaactcatacgagattcaggaaatcagactcctggcagtgaacagaaccggtggcaa
gcagaacttgcacaggtggctattgagcttattggggttgtaactaattctggccgtgca
agttctctggctgctacagatgctgcgacccccacattaaggcgtatagagagagctgct
atagctgctgctactccgatcacatatcatgcaagggaacttttacttctcatccatgaa
cacctacaagcttctggtctgacagacactgcaactatgcttcttaaggaggctcagttg
acacctttgccatctttagctgctccatcatctctggcacatcaaacatcagggcaggag
acatcatcagttcaaattcagtggccatctggtcgtgcacctagaggatttttgtcagct
aaaccgaaacttccaccattggatgaggatgggggattgaaatctgagtcaattgtctgt
tcttcaagaaggaagccattggccttttcgtctgctcgtagtttgtcctcaaaatctttt
cctgttgaagtctctccatctacatcaggctgcaaattcagtaattcgagaaagtgtgcc
acacctatagctacatcagaaactccattactatctacagtgaaagctggtggagatcca
gacatcatgtttaaaactcccattgtattgccaatgaaacgcaagttaactgatctgaag
gaaagtggatcagtatcgtcagttaagcgactcaatactggtgaacatacagtcagatct
ccggtttgtgtcactccaaattcgttccgtagaagtggtctaccatcagatactaatgtg
ccttcaacaccgaattctactttgagagagatccataatcgacctggctcaagtgctttt
ccaactgaaggtgatgatactcctatgctgtcgtcttctcaacatggtcttctaagtgac
acacaaccctcaaatgcggagcggttaaccttggactctctggttgttcagtacttgaag
caccagcatcgccaatgtcctgctcccatcacaacgttaccgcctctttcgctcttgcac
cctcacgtctgtcctgaaccaaaacgaagccttgatgcaccatcaaatgtaacatcacgg
cttagtactcgtgattttagaagtttgaatggtgggacacatggaaagcgtaaggatcga
caattcgtctacagtagatttcgaccgtggcgcacttgccgggatgatgctggtgtctta
ttgacttgtgtctcttttatgggagattcttcgcaaattgctgctggcacccattctgga
gagctgaaaatatttgacactaacagcagcagtatcttagaaagcttcaccagtcaccag
gcacctttaacacttctacagtcctacctttccgttgagacacagcttctcttgtcttca
agttctcacgatgtgcggttatgggatgcaacttctgtttcagctgggcctaagcattca
tttgaaggctgtaaagctgctcgatttagcaatttcggtacaacgtttgctgcattgtct
gcggagcaatctcggcgcgagattcttctgtatgacactcaaacctgccaagtggaactg
aaacttacagacacatccaatattccttcaggccgaggacatatgtattctcttgcacat
tttagcccatcagacaatatgcttctctggaacggtgtcttatgggatactcgtggttct
ggcccaattcaccgttttgatcaatttactgactatggtggcgggggctttcatcctgct
ggcaatgaggtcatcataaattcggaggtatgggatttgcggaacttcaggcttctgcga
agtgtaccgtctttggaccagactgtaataacatttaatgctagtggtgatgtgatatat
gccatcttgagaagaaatcttgaggatgtcatgtccgccttccagacacgtcgtgttaaa
catcctctctttgctgctttccgtacggtggatgctgttaactactccgacattgcaacc
attccagtcgaccgttgtgtacttgactttgcgacggagccaactgattcatttgttgga
ctggtaacaatggatgaccaagatgagatgtactcttctgctagagtgtatgaaattggt
cggaggaggccaactgaggatgattcagaccctgatgatgctgaaagtgaagatgaagat
gaagacgatgatgatgacattgacgaagaagcaatccttggaacggatcttgatggggac
ggtgaaagcgatgcagatgatttgagcaatgatgatgatagtgtgagtgagcttgatgac
gaagaagacgaagacggtgacttcattgtagatggtgtggacttcggtggtggaggtata
ttggagattgtgacagatggtgaagatgaagatgacagtgagcttgttgaatcctttagt
agtggggatgatgatgatgatgatctgttgtaa
DBGET
integrated database retrieval system
