Solanum lycopersicum (tomato): 101254133
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Entry
101254133 CDS
T02665
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
101254133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sly03400
]
101254133
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
101254133
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
101254133
NCBI-ProteinID:
XP_004229989
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All DBs
Position
1:complement(82978742..82982534)
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AA seq
668 aa
AA seq
DB search
MEEEKDKMVVAGLIDKATNSTRPEVEPRLLKSIKSVVRSSDSELRLAAQTLISLMKRDHS
QVRYLALLIIDELFMRSKLFRTIVVENLDQLLTLSVGFRRNLPLPPPASVASVLRPKAIE
FLEKWNSSFGIHYRQLRLGYDYLKNTLRFQFPNLQANAARIRQERREREMRTKEILLKKF
ETLKENLASIKDEIQSTVDEIGECLNILSTKDEEDILLLSLDDEDIVEFRNSELRQIRLD
SLKEGEKIKVDSENEVVFDALRELFKVLVTNHMVTLQEWISVLIRVETTDTSFRDAILKD
FIDIRNHLKSVKKKCEESGCTLPKTRSVEDEDIWEEGNVEPENGRSFKMPDQGEDCSLNL
NFNGMRVEAPECSNVSLKGKEKLQEAKGGSETDTSRGKLLAEAPVMKWGSFLDDWGSTSR
DALANQRGLDLDGHWGRVDHDAVIPAEKIAELKVHATVYREDPVEIQPCRAPLRNGELCQ
RRDLKICPFHGLIIPRDDEGKPIDTGSSIEDQAAQLVDQQEPINACPSVAEKIHDLDDKL
VEKLAKQAVKNVRQRDREETKKREQDKQILKRAKLAKVREHNQEVLRDAALASTSRSLHA
GEDQDRSSLSKSSSTSKKETLASMLKKKETAKDRLGQRLLNARARDATVRQLTVAEDSNY
REAFPNQW
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaaaaagataaaatggtggtagcagggttaattgataaagccaccaactcc
accagaccagaagtggagccccgacttctcaaatccatcaaatcggtggtccgttcctct
gattccgagctccgactcgctgcgcaaaccctaatttccctcatgaaacgtgaccactct
caggtacgatatctcgctcttctcataatagatgaactctttatgcgctcaaagcttttt
agaactattgttgtcgagaacttggatcagttactcacattaagtgttggcttcagaagg
aatctgccgcttccgcctcctgcctctgttgcttctgtattacgccccaaagcaattgag
ttcttagagaagtggaattcttcatttggtattcattataggcagctcaggctggggtat
gactatttgaagaacaccctccgctttcaatttccaaatttgcaagcaaatgcagctagg
attcggcaggaaaggagggaaagagagatgaggacaaaggagatcctgctgaagaagttt
gaaaccttgaaggagaaccttgcttctataaaagatgaaattcagtcaacagttgatgaa
attggcgagtgtttgaacattttaagcacaaaggacgaagaagatatattgttgctttct
ttagatgatgaagatattgtggagttccgcaactctgaactccgacaaatccgtcttgat
tccttgaaggagggggaaaagattaaagttgacagtgagaatgaagttgtatttgatgca
ttgagggaactattcaaggttctagtaacaaaccatatggtcacattgcaagaatggatc
tctgttctcataagagtggaaacaacagacactagtttcagggacgccatattaaaggat
tttattgatattcgtaatcatctcaaatcagtgaagaaaaaatgtgaagaatctggttgt
actctgcctaaaactagaagtgtcgaggatgaagacatatgggaagagggtaatgtggaa
ccagaaaatggaagatcttttaaaatgcctgaccaaggtgaggattgttccttgaatctg
aattttaatggaatgagggttgaagctcctgaatgtagtaatgttagtcttaagggaaag
gagaagttgcaggaggccaaaggtggcagtgaaactgacacctctagaggcaagctttta
gctgaagctcccgttatgaagtggggttctttcctggatgattggggatcaaccagcagg
gatgctttggcgaatcaaagaggattagatcttgacggccactggggtagggttgaccat
gatgcggtgattcctgctgaaaaaattgcagaattaaaagtccatgcaactgtttatagg
gaagaccctgttgaaatccaaccatgtcgagcccctttgcgaaatggagaactttgtcag
aggagagatttgaaaatttgtccatttcatggacttattattcctcgagatgacgaaggc
aaaccaattgatacaggttcatcaatagaagatcaggctgcacagttggtggatcagcaa
gagcccatcaatgcatgcccttccgttgcggagaaaatacatgatttggatgataaactt
gtggaaaaattagccaagcaggctgtaaaaaatgtccgtcaaagagatagagaggagaca
aagaagagagagcaggacaaacagattttgaagcgggcaaagcttgcaaaagttcgagaa
cataatcaagaagttctacgtgatgctgcactggcgtccacctcaagatccttacatgct
ggagaagatcaggatagatcgtctttatctaaatcttcgtccacgagtaagaaagaaact
ctagcatctatgttaaaaaagaaagaaactgccaaagatagattgggtcaaaggcttcta
aacgcccgtgctagagatgcaacagtacggcagttaacggtggctgaggattcaaattat
cgtgaagcctttccaaatcagtggtaa
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