Solanum lycopersicum (tomato): 101254366 Help Entry 101254366         CDS       T02665                                  Name (RefSeq) uncharacterized protein   KO K15710   E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.- 2.3.2.27] Organism sly  Solanum lycopersicum (tomato) Brite KEGG Orthology (KO) [BR:sly00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:sly04121]     101254366 Enzymes [BR:sly01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      101254366 Ubiquitin system [BR:sly04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     101254366 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom SHPRH_helical-1st Helicase_C SHPRH_helical-2nd zf-RING_UBOX PHD zf-C3HC4 RING_XB3-XBAT31 zf-C3HC4_2 zf-RING_2 PHD_5 zf-RING_5 TPR_12 TPR_2 TPR_10 TPR_7 Motif Other DBs NCBI-GeneID:  101254366 NCBI-ProteinID:  XP_010318228 LinkDB All DBs Position 3:53650693..53690610 Genome browser AA seq 1679 aa AA seqDB search MGRKKSKPNRSVGILEAEVPKGKLNGETDAGTAEKDESFVVDVPFFVEIDRSNWLSDKHM DISEIVLSDLNVSDEFGNYVLDEDFFRDSRYLLRFRVSNVNEHLTRIKLGHWPVLSATSI CLEIVAKQEKEGLEEMVVLIEGSFDGPDEGISGLVHLASLKFFTLRPVIVPSYLASIRMK VEILKSAFDGCESLLDTSRQLWKKSMMNVMAWLRPEVVTAEARYGYQVAAHADIGLASGL DESSSSARKLSRFDVASFYEAIKPSKEEPMLDDDLPGLLPKLRPYQRRAAYWMVQREKRN SDGSLLSKINHFISPLCMPLSLIDTPITIYYNPFCGNVSLHPESTPPVVPGGILADEMGL GKTVELLACIFTHQVASSSIGNFTGEFLCDEGQKNSLKRLKRERVECICGSVSESIRYKG LWVQCDACDAWQHADCVGYSANKRYKKSKAILTEQQSTGNMHKHAKRKNGVKIVEMEDGY ICQPCSELIQACVAPVGSGATLIVCPAPILPQWHAEIVRHTSPGAMKTCIYQGVRNNSLS QTPLPDINELLNASIVLTTYDVLKEDLSHDSDRHEGDRRALRFEKRYPIVPTLLTRILWW RICLDEAQMVENNAAAATEMALRLHGVHRWCITGTPIQRKLDDLFGLLRFLNASPFNTLR WWTDVIRDPYERGDSRAMTFTHDFFKHLMWRSSKVHVADELQLPPQEECVSWLYLSPIEE HFYQRQHDTCVNDARELIGSFKNDIYKRKIPGSQLEDAASDVVITNIEAAKLFNSLLKLR QACCHPQVGSSGLRSLQQSPMTMEEILSVLVSKTKVEGEEALRRLVVALNALAGIAIINQ NYTQAVSLYQEAMALAEDHFEDFRLDPLLNIHITHNLSEVLPLSSDSSQKLECAPGSTRG EVSNIEDAEESDKGALLREDKVKEESMLLTNSNGPSNLMSNSLENCSVDENSVNRLNFLS KSTMTIACEKLKEKFLCVFNLKLAGAQQEFKKSYDQVCNAFSDRKNQYTAWWLEALHHIE QNKDSSNELIRKIGEAVSGTLNTSRASKVASCFHSITALKIYIQSGLDSLESSRESLLVK LLEIDQTMGNPRKEDIARVRYCPKCYADSEGLLCVHCELNDLFQVYEARLFRLNKGKSGE VITSAEEAVDLQKKKSQLNRFYTTLARTDRNSGSATIEYEDFGKKRDLENIVVSKAPSDL EVVLVLIKSNSRGLLDAEGVSAARKQLQLLEGMRKEYAQARLLATAQAHVLRAHDEIMMA TSRLRLKEDENDKSIDALDPGELDAANVEWSSEKFLFLSSLSRIKGQLRYLKGLVQSKQT NHLASSENSNVTRATIVTAAHAEEKKEHQAIIEEDTCPVCQEKLNNQKMVFQCGHVICCN CLFAMTEKRLALHGKPQVSWLMCPTCRQHTDCRNIAYAVDRRNMSCPSSSIASENSEAST NVQGSYSTKIEAVTRRILWITSTNPVAKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGR KSHAAISQFRGHNNNVEENGKRHVGQPETRSIQVLLLLIQHGANGLNLLEAQHVILVEPL LNPAAEAQAIGRVHRIGQAHKTLVHRFIVKDTVEESIYKLNKSRNIGSFVSGNRKNQDQP ILTLRDVESLFRVAPAPSTDEEATESLNHFPPSVAASIAAERRLREQTSGQEPQENCCC NT seq 5040 nt NT seq  +upstreamnt  +downstreamnt atgggtcggaagaaatctaagccaaatcgttctgttggaattttggaagcagaagttcct aaggggaaattaaacggtgaaacagatgctggaactgcggaaaaagatgagtcttttgta gttgatgtgccattttttgttgaaattgataggtctaattggttatcggacaaacatatg gatatttctgaaattgttttatcagacttgaatgttagtgatgagtttggtaattatgta ttggatgaggattttttcagggattcaaggtatttattgaggtttagggtcagtaatgtt aatgagcatcttactaggataaagttgggtcattggcctgtattatctgctactagtata tgtcttgaaattgtagcaaagcaggagaaagagggtttggaggaaatggttgtgttgata gagggaagttttgatggacctgatgagggtatatcagggttagtccatctggctagtttg aagttcttcacattgaggcctgttattgttccgagttatttagcatctatacggatgaag gtcgagattttgaaaagtgcctttgacgggtgtgagtcacttctggatacatccagacag ctatggaaaaagagcatgatgaatgtgatggcttggctacgtccagaggttgtcacagca gaggctagatatggataccaggtggcagcacatgcggatattggtctagcttcggggctg gatgaaagttcttcttctgcaaggaaactttctaggtttgatgtagctagtttctatgaa gctattaagccatcaaaggaggagccgatgcttgatgatgacctccccggtttgcttcct aagcttagaccttaccagcgccgtgctgcttattggatggtgcagagggagaaaagaaat tccgatggctccttgctaagcaaaataaatcactttatttctcctctgtgtatgccactg agtttaattgacacccctataacaatatattacaatccattttgtggaaatgtatccttg catccagagagcaccccaccagttgttcctggtggtatattagctgatgagatggggctg ggaaagactgttgagctgcttgcttgtatctttacacatcaggtggcatcatcttccatt ggcaattttactggtgaatttctgtgtgatgagggtcagaagaatagtctgaaaagactg aaaagagagcgtgttgagtgtatatgtggttctgtgagtgaaagcatcagatataaagga ttgtgggttcagtgtgatgcttgtgatgcgtggcaacatgcagattgtgtgggctactca gctaacaagagatataaaaaatccaaagcaatcttaactgaacagcagtcaactgggaat atgcacaagcatgctaaacgcaaaaacggtgttaaaatagttgaaatggaagacggctat atctgccagccatgctcagaactgatccaagcctgtgtagcaccagttggctcaggtgca actcttatagtgtgtccagctcctatattgcctcagtggcatgctgaaattgttcgtcat acaagtcctggtgctatgaaaacatgcatttatcaaggagtgaggaataactctttatca caaacacccctgccagatataaatgaacttctcaatgccagcatcgttttgacaacttat gatgtactaaaagaggacttatcacacgactctgacaggcacgagggtgatcgtagagct ctgagatttgagaaaagatatcctatcgtacctaccctattaaccagaatattatggtgg aggatatgtctggatgaagctcaaatggtggagaataatgctgctgctgcaactgaaatg gccctaagactacatggagttcatcgatggtgcattacagggactcccatacaaaggaaa cttgatgatttgtttggtctcttgagattccttaatgcaagtccatttaatactttaaga tggtggactgatgttatacgcgatccttatgagaggggagattccagagcgatgactttc acgcatgatttctttaagcacctaatgtggaggtcatcaaaggtgcatgttgctgatgaa ctgcagcttccacctcaagaagaatgtgtctcttggctttatctttcaccaattgaagaa cacttttatcaaaggcagcacgatacgtgtgtgaatgatgctcgtgaacttattggaagt ttcaaaaatgacatatacaagagaaaaatacctggttcccaattggaagatgccgcaagt gatgttgttatcaccaatatagaggctgccaagctctttaactcccttctaaaactacgc caagcctgttgccaccctcaggttgggagctctgggttgcgatcgctacaacagtctccc atgactatggaggagatcctgtcggttctggtaagcaagactaaggtggaaggagaggaa gccctccggagattggttgttgctttgaacgcgctggcaggtattgctataattaatcaa aattatacccaagccgtatcattgtaccaagaagcaatggctttagcagaagaccatttt gaagatttccgattggatcctttgttaaacatccatattacacataatctttctgaggta ctcccactcagctctgatagttcgcaaaagcttgaatgtgcacctggaagcacaagaggt gaagtatccaacatagaagatgctgaagaaagtgataaaggggctctactcagggaagac aaagttaaggaagaaagcatgttattgactaactctaacggtccatccaacttaatgtca aattcactggaaaactgttctgttgacgaaaattctgtcaacaggttaaactttttgtcc aaatctacaatgacaatagcatgtgaaaaattgaaggaaaaattcctatgtgtttttaat ttgaagctggcaggggcccaacaagagttcaaaaagtcatatgatcaggtatgtaatgca ttcagtgatagaaagaatcagtatactgcttggtggctggaagctttgcatcatattgag caaaacaaggactcctcaaatgaattgattaggaaaataggagaagctgtttctgggact ctgaacacctctagggcatccaaagttgcttcctgtttccacagcattactgctttgaag atctatattcagagtggtttagattcactggaaagttcgagggaatctttacttgttaag cttttggaaattgaccagacaatgggcaatcctaggaaggaggatattgctcgtgttaga tactgtccaaaatgctatgctgattctgaagggctattatgtgttcactgtgaactaaat gacttgttccaggtttatgaagccagactttttcgtcttaacaaagggaagagtggggag gtgattacatctgctgaggaggctgtagatctgcagaagaagaagtctcaactgaatcgt ttttatacaactttagcccgaacagacaggaattcaggatcagctaccattgagtatgaa gattttggaaagaagagagacttagaaaacattgtggtgtccaaagctccatctgatttg gaagtagtgttagtgcttatcaagagcaactccaggggcctgttagatgctgaaggtgta tcggctgccagaaagcagctgcagcttcttgaggggatgcggaaggagtatgcacaagca aggctcctggcaacagctcaagcccatgttctacgtgctcatgatgagattatgatggca acttctcgactacgcttaaaagaagatgagaatgacaaatccattgatgccttagatcca ggagaactagatgcagccaatgttgaatggtctagcgaaaagttcttatttttatcttct ttatcgagaataaaggggcagcttcgctacctgaagggtttggtacaatccaaacaaact aaccatcttgcaagtagtgaaaattcaaatgtaactcgagccacaattgtcacagcggct catgcagaagaaaaaaaggaacaccaagccattattgaggaagatacatgccctgtttgt caagagaagctcaataatcaaaagatggttttccaatgtgggcatgtcatttgttgtaat tgtttgtttgcaatgactgagaagagattagcccttcatgggaagcctcaggttagctgg ttaatgtgcccaacttgtaggcaacatactgactgcagaaatattgcttatgctgttgac agacggaatatgtcatgtccatcttcttctatagcctctgagaattctgaagcttcgaca aatgtccaaggttcatatagtaccaagattgaagctgtcaccagaagaattttatggatc acttccacaaatccagtagctaaggttcttgtctttagcagttggaatgatgtgctggat gtattagagcatgcgtttgcggctaacaacataacttttgtgcggatgaaaggaggaagg aaatcacatgctgccatcagccaattcagaggccacaacaacaatgttgaagaaaatggc aaaagacatgtgggccaaccagaaactagatccattcaagtgttgctgctcctgatccaa catggagccaatggcctcaatcttctggaagcccagcatgttatacttgttgaaccattg ctgaatcctgcagcagaggcacaagccattggcagggtgcatcgaattgggcaagcacat aagactcttgttcaccgttttatagtgaaagacacagttgaggaaagcatatacaagctg aacaagagcaggaatattggttcatttgttagtggaaacagaaagaatcaagatcagccc attttgacgctaagagatgttgaatccttattcagggtggcaccggcaccttccaccgat gaagaggcaacggagagcttgaaccattttccaccttctgttgctgcttctatagctgct gagaggaggcttagggaacaaacatctggtcaagagccacaggagaattgttgctgttga

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