KEGG   Solanum lycopersicum (tomato): 101254462
Entry
101254462         CDS       T02665                                 
Name
(RefSeq) DNA polymerase epsilon subunit B
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03030  DNA replication
sly03410  Base excision repair
sly03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101254462
   03410 Base excision repair
    101254462
   03420 Nucleotide excision repair
    101254462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sly03032]
    101254462
   03400 DNA repair and recombination proteins [BR:sly03400]
    101254462
Enzymes [BR:sly01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     101254462
DNA replication proteins [BR:sly03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    101254462
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      101254462
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT CcmE DUF5523
Other DBs
NCBI-GeneID: 101254462
NCBI-ProteinID: XP_004235385
LinkDB
Position
3:57415742..57421610
AA seq 529 aa
MSGVLRNKVQRKFKMRGYSLKVEALSEVLSFLSHFPSDAFDDALELLLDELHHLSLKSSI
LDREPVHKVVSLLLEADAAVEENPSSSSSSASALRVIDTFIVPKFRYDPVKKFFHEHTGR
LPIHGDASAKATLYKDRFLLLFQRVSRDPRFSTLAFDASSSDYGSCEISPIQSLVGRVGR
RWIMGVISQLEDGHFYLEDLTAAVEVNLSSAKITTGFFLENTIVLAEGEMQLDGVFQVRT
CGFPPLEDREKSMAFFSGLDFFGGGILTKEETLRLVELEKNAVNDMFVILSDVWLDNEET
LGNLETILNGYENVEVVPSLFVFMGNFCSQPFNLSFKSISSLRVQFGKLGQMIASHQRLK
EHSRFLFIPGPDDVGPSTALPRCTLPKYLTEEFQKYVPNAIFSSNPCRIKFYTQDIVLFR
HDMLYRMRRSCLIPPSMEETSDPFEHLVATIIHQSHLCPLPLTVQPIIWNYDHGLHLYPT
PHTIVLGDKSEQKAFRYTGVTCFNPGSFSNDGTFVAYRPCNQEVELSAL
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgagcggagttttaagaaacaaagtacagaggaagttcaagatgagaggttactctctc
aaagttgaagctctctccgaagtcctctctttcctttcccatttcccttctgatgctttc
gacgacgctcttgaactccttctcgatgagcttcaccatctttcattgaagtcctcgatt
ttggatagggaaccggtgcataaagtggtgagccttttattggaagcagatgccgccgtt
gaagagaaccctagctcaagttcttcatctgcttctgcccttcgggttattgatactttt
atcgtccctaaatttcgatacgatcctgttaagaagttctttcatgagcacacagggagg
cttcccattcatggtgatgcttctgcaaaagccaccttatacaaggatagattcctctta
ttgtttcaaagggtatctcgtgatccacggttttcaactcttgcttttgatgcctcttct
tctgattatggcagctgtgagatatctcccattcaatcacttgttggacgagtagggaga
agatggataatgggagtaatatctcagttggaggatggtcatttctacttggaagacctt
actgcagctgttgaagtaaatttatcgagtgcaaagataactacaggtttctttttagaa
aatacaattgtcttggcagaaggtgaaatgcaattggatggtgttttccaggtcagaaca
tgtggttttcctccattagaggacagagaaaagtccatggcgtttttttcgggactagac
ttctttggtggtggtattcttaccaaagaggaaactctaaggcttgtagagctagagaaa
aatgctgtgaatgatatgtttgttatactatctgatgtatggctggacaatgaggagact
ttgggaaatctggagacaatcctcaatggttatgaaaatgtagaggtggttccttcttta
tttgtcttcatgggaaacttctgctctcagccatttaatctttcattcaagtccatctcc
agtctcagagttcagtttggaaagcttgggcaaatgattgcatcgcaccaacgactaaaa
gagcatagtcgatttctttttatccctggtcctgatgatgtaggtccttcaacagcctta
cccagatgtactttgcctaaatacctaactgaagaatttcagaaatatgttcctaacgca
atattctccagtaacccatgcagaatcaagttttatacccaagacattgttctattccgc
catgatatgctttatagaatgcgaagatcgtgtctgatacctccctcaatggaagaaacc
agtgatccatttgagcatcttgttgcgactataatacatcaaagccatctctgccccctc
cccttgacggttcaacccattatctggaattatgatcacggtctacacctatatccaacc
ccgcatacgatagtgttgggggacaaaagtgagcagaaagctttcagatacacaggagtt
acatgttttaatcctggttccttttcaaacgatggcacatttgtggcataccggccgtgc
aatcaagaagtagaattatcagcgttgtaa

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