Solanum lycopersicum (tomato): 101254471
Help
Entry
101254471 CDS
T02665
Symbol
PL
Name
(RefSeq) pectate lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101254471 (PL)
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101254471 (PL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101254471
NCBI-ProteinID:
NP_001351955
LinkDB
All DBs
Position
3:59133773..59135899
Genome browser
AA seq
403 aa
AA seq
DB search
MGTSSVFLLFLLSFLLLLPSLLASSNPQQVVDEVHRSINGSRRNLGYLSCGTGNPIDDCW
RCDPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGDDNAVTPKPGTLRHAVIQTEP
LWIIFARDMVIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGIHIHDCKQ
GGNAMVRSSPSHYGWRTVSDGDGVSIFGGSHVWVDHCSLSNCKDGLIDAIMGSTAITISN
NYMTHHDKVMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAIGGSADPTINSQGNRFLAPDIRFSKEVTKHEDAPESEWKNWNWRTDGDLMLNGAFFT
RSGVRTGSSSYAKASSLSARPSSLVANLVSSSGALNCKKGSRC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgggcacttcctctgtttttctactattccttctttcttttcttctccttctcccgtcc
ctccttgcctcctctaatcctcaacaagttgtcgatgaagtacacaggagtataaatggt
tcaaggaggaatttagggtatttatcgtgtggtaccggaaatccaatcgacgattgttgg
cgttgtgatccgaattgggagaaaaaccgtcagcggttagctgactgtgcaattggattt
gggaaaaacgctattggtggtagagacggtaaaatctacgtggtgaccgattcgggtgac
gacaatgccgtcactccgaagccggggactctccggcacgcagtgattcagactgagcca
ctgtggattattttcgcgagggatatggttatacagttgaaagaggaattaattatgaat
tcgtttaaaacgatagacggaaggggcgctagcgtacacatagcgggtggtccgtgtata
acaatacagtacgtaacgaatattattatacacggaattcatatacatgactgtaaacaa
ggtggaaatgctatggtgcggagcagtccatcgcattacgggtggagaactgtttcggac
ggtgatggagtgtccatattcggtgggagccatgtttgggtggatcattgttctttgtcc
aactgtaaggacggtctgattgatgcgattatggggtctacagcaataaccatttcaaat
aattacatgacacatcatgataaagttatgctcttgggacatagtgatacatatactcaa
gataaaaacatgcaagtaactatagcttttaatcactttggtgaaggtcttgtccaaaga
atgccaagatgtagacatggttacttccatgtggtgaacaatgactacacacattgggaa
atgtatgctattggtggaagtgctgatcccactatcaatagtcaagggaaccgatttctt
gcccctgatatcaggtttagcaaagaggttacaaagcacgaggatgcaccggagagtgaa
tggaagaattggaattggaggaccgatggggacctaatgttgaatggtgcattttttacg
cgatcaggagttagaactggttcatcaagttatgctaaagcttcgagtttgagtgcaagg
ccgtcttcattagtagccaatcttgtgtctagttctggtgcactcaactgtaaaaagggt
tctcgttgctaa
DBGET
integrated database retrieval system
