Solanum lycopersicum (tomato): 101254782
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Entry
101254782 CDS
T02665
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic isoform X2
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sly03000
]
101254782
Transcription factors [BR:
sly03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101254782
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
101254782
NCBI-ProteinID:
XP_004236896
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All DBs
Position
4:2714611..2722047
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AA seq
530 aa
AA seq
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MAGGSSTSSMFFGMREEELSQNQQENLLQAQAPSKKRRNQPGTPSPDAEVIALSPNTLMA
TNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNTKEVAKRKVYLCPEPTCVHHEPSR
ALGDLTGIKKHYFRKHGEKKFKCEKCSKKYAVQSDWKAHTKTCGTREYRCDCGTLFSRRD
SFITHRAFCDALVQENARNILSPNSLMNTLGMNNNQYLYGSSSNINLGTFSKLGNNNNIT
KTTTTTTTTTSGVQFDHHHHDNNLIGSSTTTTTTTNNPFFLQDTNQDHYNANNNNIKPLM
VHGLMQLPNLDHNNNNSSSSTTMFNLNFFQNNLSTNSGILGDHHHHHHRHDNNSNISCSI
PSLYGVQVLESSNTTFSSGPIMSATALLQKAAQMGSSSTSNISATASLFKAFGSNTSGSS
SSGTKSDHQAFNFGSDITDSGIINAYGGGSHEGYNTTTKLNFEQNQGPPQKKQLTRDFLG
VGEIVRSMNGRFSTQREQQQQNNGLNNMMSSLLDPERNQIQQSFGSATND
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggctggaggttcatcaacatcatctatgttttttggtatgagagaagaagaattaagt
caaaatcaacaagaaaatctccttcaagctcaagcaccatcaaagaagagaagaaatcaa
ccaggcacaccaagtccagacgcagaagtgatagcgttatccccaaatactctaatggca
acaaatagattcttatgtgaggtatgcaacaaaggttttcaaagagaacaaaacttacaa
ctccatagaagaggacacaatttgccatggaaattaaagcaaaaaaatacaaaagaagtt
gcaaagagaaaggtttatctttgtccagaaccaacatgtgttcatcatgaaccaagtaga
gcacttggtgatcttactgggattaaaaaacattattttagaaaacatggtgaaaaaaaa
ttcaaatgtgaaaaatgttcaaagaaatatgctgttcagtctgattggaaagcacataca
aaaacttgtggcactagagagtatagatgtgattgtggcactcttttctcgaggcgcgac
agcttcatcacacatagagccttttgtgatgccttggttcaagaaaatgcaagaaatatc
ctttcaccaaactccttgatgaacacccttggcatgaacaacaaccaatatttatatgga
agtagtagcaacataaacttaggcaccttctccaaattgggcaataacaacaacatcaca
aagactactactactactacaactactactagtggtgttcaatttgatcatcatcatcat
gacaacaacctcattggatcaagtactactactactactactactaacaatccctttttc
cttcaagatacaaatcaagatcattacaatgccaacaacaacaatatcaaaccattaatg
gtccatggcctaatgcaacttcctaatcttgatcataacaacaacaatagtagtagtagt
actactatgtttaacctcaacttttttcaaaacaatttgtctaccaatagtggaattttg
ggtgatcatcatcatcatcatcatcgtcatgataacaatagtaatataagttgttcaatt
ccatcactttatggggtacaagtacttgagagtagtaatacaactttttcatctggacca
ataatgtcagccacagcattactacaaaaggcagcacaaatgggatcttctagtacaagt
aatattagtgcaactgcctcattgttcaaagcctttggaagtaatactagtggttcatca
tctagtggcacaaaatctgatcatcaagctttcaactttggtagtgacattacagatagt
ggtatcatcaatgcttatggaggtggatcacatgaagggtacaatacaacaacaaagttg
aactttgagcaaaatcaaggtccacctcaaaagaagcaattgactagagactttcttgga
gttggggagatagtaagaagtatgaatgggagatttagtacccaaagagaacaacaacaa
caaaataatggattgaacaatatgatgagctcattgttggatccagagagaaaccaaatt
caacagagttttggaagtgctaccaatgactag
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