Solanum lycopersicum (tomato): 101254818
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Entry
101254818 CDS
T02665
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X2
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101254818
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
101254818
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101254818
NCBI-ProteinID:
XP_004245511
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Position
8:65341932..65350071
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AA seq
1357 aa
AA seq
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MPRSSKHKSHKQSKYSPKECRDYSYSDSDSEVKTKEKEKERSSKEDSLARVSKDSIHSGS
GEKRKHSSQSKEGKDGKDLSGYGNGDASEEYVSSKRRKEKVEVGSGGADRWNGAADNALK
GESLKIDADKGSKGKETKSSSDSKSKSSKKEGNVASLVEKEESKSGRVESKRKSEKDSGR
KEGKDSKEVKEKERGSDREKKGHESKRDDADNVKKQGSQSGDVTEEKQNKKGRETAEWSI
QNEAPNVDLDKDAEKRARKRREIPGDRDKYDDDINEGDERRLSSRSERTKGEKQRHEKHK
EYKEDVDKDDRHKDDRYREDVDKDRKRRDDKYREDSDRDNRRRDDKYLEDVDRDSRRRDD
KYRDDGDRDNRRKDGRYREDDERDSRRRDDKYREDGDNDNRHGDDKYREYGEKDGHHDED
RYHEEGERDDRQRDIKYREDSERDKRRKDEKHRDDFERHGRCKDVSEADESDKKRRLNDA
KYGDERAPRDHSGDRTDAKRSRDEGHASDLHLRRSGMHEGNPGYDRARYKDEPGRRRALD
KEDLGDIRSRSSKDQRSDAEKRSISSVRVESVSDRGRSTSRNADAELTPQKSRWKSSPNA
GPHSTRDNYRLSKQEESKYRDYPYEERIRHGGASRDYAGSAASIERISSSRSTEKMIQKE
DIFLGDHSAERRLKSDVRSSPMHLVDRSPTSASNERRHLNRSDVRRSLDVEDSTQRSGGG
SREVKEGRGNRDFAGDAFAGDELSQMDGDNASDSSPFIRGSHLSGSSKSALPPPPPFRSG
VDSPSMFGSLDDDSRGKSTNRHRRINDPTIGRMQGNAWKGVPNWPSPLANGFMPFQHGPP
PVGFHPAMQQFPGPPMFGVRPSMDLSHPGVPYHMPDADRFSGHGRPMGWRTPLDDSCGPP
LHGWDANNFGEEAHLYGRPDWDQNRTLSNNSRSWETIGDVWKGPIRGTSVEVPSGSQKEV
CSIQGPDNSFASQLAQQALGEQKQTDQDAESNNISFQSSSVPGRNTLEDLKINHEEQPID
VKSSGKGEASLNNVYLKKLDISADLTEPELFDRCTSLMDVEQILTSDNSKILFLEGAVES
NVVLPSKFSTVPLIATVADSVFQKAISLYKRREKIEFTNGGHFTFSGQLGVSSPAPKLEN
SSSVHGKLECSGLVDDALVEEGDEGTDLLVSSISSEEVVLSQTTLQELCEPMGLNPGEKS
DLPSSLDEGAVPTEKSDFPTTMDEGAVPIEKPDLPTSMDEGAVLSEKSDLPTSMDEGAGP
SEKSDLPTSMDEGAGMEADTVVDVAQEIKVLETAEEVGQTDALASLVSKDLMGADDVDAK
CDALPHTDVSTEVFEAVVPESIESNLSRIQHSSESTH
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggagttcaaagcataaatcgcataagcagagtaagtatagtccgaaggagtgt
agggattattcgtactcggattcggattccgaagtgaaaaccaaggagaaagagaaagag
aggagtagtaaggaggatagtctggctagggtttctaaggattcaatccattcgggttct
ggtgagaagagaaaacattcttcccaatctaaggaaggcaaggatggtaaagatctaagt
gggtatggaaatggtgatgcttcggaggagtatgtttcttctaagcgtcggaaagagaag
gtagaggtaggtagtggtggtgctgatagatggaatggtgctgctgataatgcattgaag
ggagaaagtttgaaaattgatgcagacaagggttctaaggggaaggagacaaagagctca
agtgattccaagagtaaaagcagtaagaaagaaggtaatgttgcctcattggtggaaaaa
gaagagagtaagagtggaagagtggagtcaaagaggaaatctgagaaggattctggtcga
aaagaaggcaaggattccaaggaggtgaaggaaaaggagagagggtcagacagggaaaag
aagggtcacgagagtaagcgtgatgatgctgacaatgtgaagaaacaagggtctcaatct
ggtgatgttactgaagaaaagcagaacaaaaaaggtagagaaactgctgagtggtctatc
caaaatgaggcaccaaatgttgacttggacaaagatgctgagaaaagggcccggaagcga
agagaaatccctggagatcgggataaatacgacgatgacataaatgagggcgatgaaaga
cggttatcttcgaggtctgaacgtactaaaggtgaaaaacagcgacatgagaaacataaa
gagtacaaggaagacgtcgataaagatgacaggcacaaggatgataggtatcgcgaggac
gttgataaggacagaaaacggcgtgatgataaatatcgagaagatagtgatagagataat
agacgtagagatgacaagtacctggaagatgttgacagagatagcagacgccgggatgac
aaatatcgtgatgatggtgacagggataataggcgcaaggatggtagatatcgagaagat
gatgaaagagacagtcgtcgtagggatgacaaatatcgtgaagatggtgacaatgataac
aggcatggggatgataagtatcgagagtatggggagaaagatggtcatcatgatgaagat
agatatcatgaagagggtgaaagagatgataggcagagagacatcaagtatagagaagac
agtgaaagagataaaaggcgcaaggatgagaagcatcgggacgattttgaaagacatggc
agatgcaaggatgttagtgaagcagatgaaagtgataaaaagaggagactcaatgatgcc
aagtatggggatgaacgtgctccgagagaccattcaggtgaccggactgatgcgaagcgt
tccagggatgagggtcatgcttctgatttgcatttgaggaggtcaggtatgcatgaaggt
aaccctggttatgatcgtgcaaggtataaagatgagccaggaagaaggagagcgcttgat
aaagaggatcttggagatattagatctcggagcagtaaagatcagcgatctgatgcagag
aagagatccataagcagtgtcagagtagagtctgtctctgatcgtggaaggtctacctca
aggaatgctgatgcagaacttactccacaaaaaagcaggtggaagtcttcacctaatgct
ggacctcatagtacaagagataattacaggttgtcaaaacaggaagagtccaagtacagg
gattacccgtatgaagaaaggattcgacatggtggagcatctcgagattatgctggttct
gctgcatcaattgagagaatttcttcatctcgttcaacagagaaaatgattcagaaggag
gacatctttcttggagatcactcagctgaacgacggcttaaatcagatgttcgcagttct
cccatgcatttggtggatagatctcctacttcagcgagcaatgagcgaagacacttgaat
agatctgatgttcgccggagtcttgatgttgaggattcaacacagagaagtggtggtggt
tccagggaagtaaaggaaggtagaggaaatcgtgactttgctggcgatgcatttgcaggt
gatgaactatctcaaatggatggagataatgcctcagattcttctccttttatcagaggg
agtcatttgtcaggcagttcaaagtctgctttacctcctcctcctccatttaggtctggg
gttgacagcccatcaatgtttggctctttggacgacgacagtagagggaagtctaccaat
cgtcacagaagaatcaatgatccgactataggaagaatgcaaggaaatgcttggaagggg
gttccaaattggccgtcacctctggcaaatggtttcatgcctttccagcatggtccacct
cctgttggtttccatcccgcaatgcagcagtttcctggaccaccaatgttcggtgttagg
ccttcaatggacttgagtcaccctggggttccttaccatatgccagatgcagaccgcttt
tctggccatgggcgcccaatgggttggcgaactccactagatgattcatgtgggccccca
ttgcatggatgggatgctaacaattttggtgaagaagctcacctttatggaaggccagac
tgggaccagaataggacattgtccaacaatagtcggagttgggagacaattggtgatgta
tggaaagggccaataaggggcaccagtgtggaggtgccatccggttcacagaaggaggtc
tgttcaattcagggccctgataattcttttgcttctcagttggctcagcaagctctgggt
gaacaaaagcagacagatcaagatgctgaaagcaataatatcagttttcagtccagcagt
gtccccggaaggaacactctagaagatttgaaaattaatcatgaagagcaaccaattgat
gtgaagtcatcagggaaaggagaggctagtcttaacaatgtttacctcaaaaagcttgat
atctcagcagatctgacagagcccgagttgtttgatcgatgtactagtttaatggatgtt
gagcagatcttgacatctgataactcaaagatcttattcttggagggtgctgtagaatct
aatgtagtgctgcccagcaaattttcaactgttccactcattgctactgtggctgattct
gtttttcagaaagccatttccctttacaagaggagggagaaaattgaattcacaaatggt
ggacattttactttctctggtcagctaggtgtgtcctctcctgcacctaaattagagaat
tcaagttcagttcatggtaaacttgaatgctccggtctggtggatgatgcgctagtagaa
gagggtgatgaggggactgatctccttgttagttctattagttctgaggaggttgtactt
tcacaaaccacacttcaggagctgtgtgagccaatgggtttgaacccaggcgagaaatca
gatctcccttctagcttggatgaaggagctgttccgactgagaaatcagattttcctact
accatggatgaaggagctgtcccaattgagaaaccagatctccctactagcatggatgaa
ggagctgttctgagtgagaaatcagatctccctactagcatggatgaaggagctgggccg
agcgagaaatcagatctccctactagcatggatgaaggagctggcatggaagctgataca
gttgtggatgtggcccaggaaattaaagttttagaaactgcggaagaggtgggccaaact
gatgcccttgcttctctggtgtctaaagatttgatgggggctgatgatgttgatgctaaa
tgtgatgctcttccacacactgatgtgtctactgaggtatttgaggcagtggtgccagag
tcaattgagtctaatttgagtcggatacagcattcttctgaaagtacacattaa
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