Solanum lycopersicum (tomato): 101254901
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Entry
101254901 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X1
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101254901
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101254901
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101254901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-rbx1
zf-ANAPC11
zf-C3HC4_2
zf-RING_11
zf-RING_16
zf_RING_Vps8
RINGv
zf-UDP
SAM_Ste50p
FANCL_C
zf-C3HC4_3
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
101254901
NCBI-ProteinID:
XP_004240094
UniProt:
A0A3Q7GMU2
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All DBs
Position
5:complement(63103139..63109565)
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AA seq
509 aa
AA seq
DB search
MVGVNSFGKTICSICYEDLNPIIEDLQAVTICGHVFHELCLQQWFEYCAKGKKKNCPVCK
QACSEENANRLYFQSIGDPNVTSLTQKPPDYEEDHWELQNEVKRLERKVLGLTSTLEKQL
KDLKEVNAELFTCKEELKMEMTLKIEAVKQEAAIQQLLHLKSKELDQSTLECIKLQDRNM
ALAKELATLKLVCDFNLEEEEVLKRASLRDDVNRLETIDVLKKSLVIRNKNYEELMTKCN
TLDRREVRYLRKLQKTKEKKNNLKARVQELEMALEGKDNEILRISKASKKNYHGRKGPKV
DRCSYENQNKEPAETEVDLCIVTGSCDDLYTPKRKRKYRSKDKSIPNMAEDIIASSLHKN
NHEKESSKRNKDGGTSETSSYVHEGSYQNLHQPFDHKKAVHDSFLSRTEAVFGATGGSLG
HGSGNKDGMETSSNCSKNSKENMPPVIILDDDDDFPPVHDITQHQPTFHIRKETFPPVVL
AKPGDRCFSGGLLGSDGNYRHLGKWCKRK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggttggagtgaatagttttgggaaaaccatttgctcaatttgctatgaagatctaaac
cctatcatcgaagatcttcaagccgttactatttgtggtcatgtttttcatgagctatgt
cttcagcaatggtttgaatactgcgcaaaaggaaaaaagaagaattgcccagtttgcaaa
caggcttgttcggaagaaaatgcaaataggctttatttccaatctattggtgatccaaat
gttacaagtcttacgcagaaacctcctgattatgaagaggatcattgggagttgcaaaat
gaggtcaaaagattggagaggaaagttttaggactgacttccactctggaaaaacagctg
aaagatctcaaagaagtcaatgcagagctgttcacgtgcaaggaggagctgaaaatggaa
atgactctaaagatagaagctgtgaaacaggaggcagccattcaacagttgctacacctt
aaatccaaggagttagatcaatcgactttggagtgcataaagctacaagatagaaatatg
gctctagctaaggagcttgcaacactcaagttagtctgcgattttaacttggaagaagag
gaggtcttgaaacgtgcttcgttaagagatgatgtcaatagactagagacaattgatgtc
ttgaaaaaatcactagtcatccgtaacaagaattacgaagaactgatgaccaagtgcaac
actctagacaggcgagaggttcgttatctgaggaaacttcagaaaactaaagagaagaaa
aataacttgaaggccagggtccaagaacttgagatggcacttgaaggaaaagataatgaa
attttgagaatttcgaaagcctccaagaaaaactatcacgggaggaaaggacccaaagtt
gacagatgttcatatgagaatcaaaacaaggaacctgctgagacagaagtagatctatgc
atcgtcactggctcatgtgatgatttatatacaccaaagagaaaaagaaagtacaggtct
aaggataagagcataccaaacatggcagaagatattatagctagcagtcttcacaaaaat
aatcatgagaaagaatcctccaaaagaaacaaagatggaggcacttcagagacttccagt
tatgtgcatgaaggatcatatcaaaacttgcaccaaccatttgaccataagaaggctgtc
catgatagttttttgtcaaggacggaggcagtttttggggccactggtggaagtctaggg
catggatcaggaaataaggatggaatggaaacctcaagtaattgcagcaagaacagtaaa
gaaaacatgcccccagtgattattcttgatgatgatgatgattttccgcctgtacatgat
attacacaacaccagcccacatttcacatcaggaaagagacttttccaccagttgtactt
gccaaaccaggagaccgctgcttttctggtggattgttaggttctgatgggaattaccgg
cacttgggaaagtggtgtaagagaaagtaa
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