Solanum lycopersicum (tomato): 101254977
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Entry
101254977 CDS
T02665
Name
(RefSeq) eukaryotic translation initiation factor 5B
KO
K03243
translation initiation factor 5B
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sly03012
]
101254977
Translation factors [BR:
sly03012
]
Eukaryotic type
Initiation factors
eIF-5
101254977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
101254977
NCBI-ProteinID:
XP_069150992
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All DBs
Position
3:22080747..22091281
Genome browser
AA seq
1308 aa
AA seq
DB search
MGRKKTTEENPEPPKHGGGGGKSKKKNRVIADDEYSVQTEEPTVQEDTVLDDDDRKKPAK
QGGGKSRKKNVVIDDDDEYTVATEEPVVLEEKVILGGKKKAKKGKKGASNYGDDLTRDND
QEDEGIAPFSGKLNKSKQGQARASVFSTVFDTIGDEESEEDKEPVVAGGMGKTIGNSFSV
ALLDEEEEADTSVSKFETETVEEDDAPELIFAGKKKSSKKKKKIAVKEEDEPEQASQAVN
PEEEADDDESKKQQRDVPETSKNKTKKKKGGRTVQEDEDEIDKILAELGEEAAPAPSEEK
VQAQLESKDNKSKKKKSGRAAQEEDDIDKILAEIGEGPLATSAPTPSLAQEEEGQLQPQL
GDAAAEKEAIEEGAMESAAAKKKKKKKEKEKEKKAAAAASSVEEKQEETKNDAKGKLADK
KQSKQVREMQERLKKMKETEERKKREEEEKLRKEEEERRLQEELEKLAEEKKRLKKEREK
EKLLKKKQEGKLLTGKQKEEARRLEAMRKQFLANGGTLPTGENKKETTKRPIYQTKKSKP
QAQANDKTQEESIEIPEVKEHHQEIVSEVDSVETEKVEDVDSTITEEKSEIADAEENEVE
EEEEDDEEWDAKSWDDADLKLPGKSAFEDEEVDSEPQPITKKEIKVASSAVHGAATLPVA
AKSVIPTQKTAAAVPGPLKIDRRRKGEPEDRNVEQNKQKGSPEEPGAPNQNEDNLRSPIC
CIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVP
GLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALN
KVDRLYGWKVCKNAPIVKAMKQQSKDVQFEYNTRLTQIVTQFKEQGINTELYYKNKEMGK
DTFSIVPTSAISGEGIPDMLLLLVQWTQKTMIERLTYSNVVQCTVLEVKVVEGHGTTIDV
VLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITA
QGFEHAIAGTSLYVVGPDDDVEDIKEAAMEDMKSVMSRIDKSGEGVYVQASTLGSLEALL
EFLKTPEVSIPVSGIGIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTQEARELSDELG
VKVFMADIIYHLFDQFKAYIDTIKEEKKKEVAEEAVFPCVLKIVPNCVFNKKDPIVLGVD
VLEGIVRIGSPICIPQKEFIDIGRIASIENNHKPVDSAKKGQRVAIKIVGFNPEEQQKMF
GRHFEMEDELVSKISRRSIDILKANFRKDLSVEDWRLVMKLKTLFKIQ
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaaagaagacaacagaagagaaccctgaacctcccaagcacggcggtggagga
gggaagtccaagaagaagaatcgagtgattgccgatgatgagtactctgtccagactgaa
gaacctacagttcaggaagatacagtacttgatgatgatgacagaaagaagccggccaag
cagggtggtggtaagtcaaggaagaagaatgtggtaattgatgatgatgatgaatacact
gttgcgacagaggaacctgtcgttctggaagaaaaagtaatacttggtgggaagaaaaaa
gctaaaaaggggaagaagggtgcctctaattatggagacgatttaacaagggataatgat
caagaggatgaaggcattgcccccttctctgggaaactgaacaagtcaaagcagggacaa
gcccgtgctagtgtgttttctacagtttttgatacaattggtgatgaagagtccgaggaa
gataaagagcctgtcgttgctggtggtatggggaagactattggcaattcatttagtgtg
gcgcttcttgatgaagaagaggaggcagatacttctgtttctaagtttgagacagagaca
gttgaagaggatgatgcgccagaacttatttttgcaggtaaaaagaagtcatctaagaag
aagaaaaaaattgctgttaaggaagaagatgaaccagaacaagctagccaagcggttaac
cctgaagaagaagctgatgatgatgaaagcaaaaagcagcaaagagatgtaccagaaact
tctaagaataaaaccaagaagaaaaagggtggtcgtacagttcaagaagatgaggatgag
attgacaagattctagcagaacttggtgaagaagctgctcctgcaccgtctgaagagaaa
gtacaggctcagctggagtcaaaagataataaatctaagaagaaaaagagtggtagagcg
gctcaagaggaggatgacattgacaaaattctggcagaaattggtgaagggccattagct
acatctgcacctactccttctcttgcacaagaggaggaaggccaattgcagcctcaacta
ggtgatgctgctgctgagaaggaagcaattgaagaaggagctatggaatctgctgctgca
aagaagaagaaaaagaagaaggagaaggaaaaagaaaaaaaggcagctgctgctgcctct
agtgtagaggaaaagcaggaagaaacaaaaaatgacgcaaaaggaaaattggctgataag
aaacagtcaaagcaggttagggagatgcaagagagactcaaaaagatgaaggaaactgaa
gaaaggaagaagagggaagaggaggagaagttaaggaaggaagaagaggaacggcgtctt
caggaagagctagaaaaacttgcagaagagaagaaacgtttgaaaaaggagagagaaaag
gaaaagcttttgaagaagaaacaagaggggaaactgcttacaggaaagcaaaaggaagaa
gctcgaagattagaagcaatgaggaaacaatttcttgctaatggtgggacactccccact
ggggagaataagaaagagacaaccaaacggccaatttatcaaacgaagaagtcaaaacca
caagctcaggctaatgacaaaacgcaggaagagtctattgaaataccagaagttaaagaa
catcatcaggagattgtgtcagaggttgattctgtggaaactgagaaagttgaggatgtg
gattcgacaattaccgaggaaaagtcagaaatagctgatgcagaagaaaatgaagttgaa
gaagaagaggaagatgatgaagaatgggatgcaaaaagttgggatgatgctgatctgaaa
ctgcctggtaagagtgcttttgaagatgaggaggtagattcagaaccgcagcctataact
aagaaagagattaaggttgcaagttcagctgttcatggtgctgcgactctgccagttgct
gccaagtcggtgattcctactcaaaaaactgctgcagctgtaccaggtccactgaagatt
gaccgaaggaggaagggtgagcctgaggataggaatgtagagcaaaataagcagaaaggc
agtcctgaagaacctggtgctcctaaccagaatgaagacaatctccggtctcctatttgc
tgtattatggggcatgttgatactggtaaaaccaagctacttgattgcatacgaggcacc
aatgttcaagaaggtgaagctggagggattactcagcagataggtgcaacttactttcca
gctgagaatatacgtgagagaactaaggagctcaaagctgatgcgaagctgaaggtccct
ggtttgttggtcatcgacactcctggacatgaatctttcacgaatctgcgttctcgaggt
tcaggcttatgtgatattgcaattttggttgttgacatcatgcatggactagaaccacag
accatagagtcacttaatcttcttaagatgaggaacacagaatttattgttgctctgaat
aaggtggataggctttatggatggaaagtttgcaagaatgctcccattgtgaaggcgatg
aaacaacagtccaaagatgttcaatttgaatataatacgaggcttactcagattgttacc
cagttcaaggaacaaggcataaatacagaattgtactataaaaacaaagaaatggggaag
gacaccttcagtattgtaccaactagtgctattagtggtgagggtattcctgacatgctg
ttgttacttgttcaatggacacaaaagacaatgattgagaggcttacttacagcaatgtc
gttcagtgcacggtgttggaggttaaggttgttgaagggcatggaacgactattgacgtg
gttttggttaatggtgttcttcatgaaggagatcagattgtcgtttgtggcatgcaggga
cccatcgttaccacaatccgagcactactaacgcctcaccccatgaaggaactccgagta
aagggaacatatttgcatcataaggaaatcaaggctgcccagggtattaagataaccgcc
cagggttttgagcatgcaattgctggaactagtctatatgttgtggggcctgatgatgat
gtggaagacatcaaagaagcagctatggaagatatgaagtcagtgatgagcaggatcgac
aaaagtggagagggagtatatgttcaagcatctacacttggatcattggaagctttgctg
gaatttttgaagaccccagaagtaagcatacctgtcagtggtattggcataggtcctgtg
cataaaaaggatgtcatgaaagctagtgttatgcttgagaagaagaaagagtatgcaacc
attttggcctttgatgtcaaagtgacacaggaagctcgggaactttcagatgaacttggt
gtcaaggtttttatggctgatattatatatcatctatttgatcagtttaaagcctacatt
gacactatcaaggaagaaaaaaagaaggaagttgctgaagaagcagtcttcccatgtgtg
ctcaagatcgtaccgaattgtgtcttcaacaagaaggatccaattgttctgggagttgat
gttcttgaaggcattgtcaggattggatctcctatatgtattcctcaaaaggagttcatt
gatattggtcgtattgcatccattgagaacaaccataagcctgttgactctgcaaagaaa
ggccaaagggtggccattaagatagttggatttaaccctgaggagcaacaaaagatgttt
ggtaggcattttgaaatggaagatgagcttgtcagcaaaatttcaaggaggtctattgat
atactcaaggccaatttccggaaagacctctcagttgaggattggagacttgtcatgaaa
ttgaagaccctctttaagatacaatga
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