Solanum lycopersicum (tomato): 101254979
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Entry
101254979 CDS
T02665
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101254979
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
101254979
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HH_signal
HVO_0758
Baculo_LEF5_C
DUF5377
Motif
Other DBs
NCBI-GeneID:
101254979
NCBI-ProteinID:
XP_004235227
UniProt:
A0A3Q7GBP4
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Position
3:complement(53699877..53704406)
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AA seq
381 aa
AA seq
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MEKELIELFDAVKRSADAAAVDGGADSSPEEDRCLDALKRLKKFPVNYQVLVSTQVGKRL
RTLTKHPREKIQMLASDVVKNWKTIIVRETMKNKNGNEVNGESVKAECAGDDGDEGNKFQ
RLNSVKVEKVARVENVTVERSSKSLTLKSERAVKAESSFTDVKSENVSVMKTENTTSKSV
KIEKKPKDEKLRSGASAAPPKLSALVYCKDPVRDKVRELLSEALCKVSVEVDDDDLRDAV
NGSDPYRVAVQVETAMFEKWGKSSGSQKFKYRSIMFNIKDPNNPDFRRKVLTGQYSPHSI
VDLSPEEMASDERQKENKKIKEKALFNSQLGGPPKASTDKFKCGRCGKNQTTYYQMQTRS
ADEPMTTYVTCVNCDNRWKFC
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagctaatcgagctgtttgatgcggtaaagagatcggctgatgcagccgct
gttgacggcggtgcagattcctcaccggaggaggataggtgccttgacgctttgaagcgg
cttaagaaatttcctgtcaattatcaagtcctcgtttccacacaggtgggcaaacgcctc
cgaacgttgacaaaacatcctagggagaagatccagatgttggcttctgatgtagtgaag
aactggaagactataattgtgagagagacaatgaaaaataagaacggcaatgaagtaaat
ggggaatctgtaaaagctgaatgtgctggcgatgatggtgatgaaggcaataaatttcag
cgtcttaactcggtgaaggttgaaaaggtggcaagggttgagaatgtgacagttgagagg
tcaagtaagtctctgactctaaaatctgagagagcagtgaaggcagaaagttccttcact
gacgtaaagtctgagaatgtttctgttatgaagactgagaatacaacttccaaaagtgtt
aagattgagaagaaacccaaggatgaaaagttgagatctggggctagtgctgccccacca
aagttgtctgctcttgtttattgcaaggatcctgtgagagacaaagttcgggagctcctt
tctgaggctctttgcaaagtctctgttgaagttgatgacgatgatttgagggatgctgtg
aatggttctgatccttatagagtggcagttcaggttgagactgcaatgtttgagaagtgg
ggaaaatctagtggctcccagaagtttaagtataggtcaataatgtttaatatcaaggat
ccaaacaacccagatttccggaggaaagtccttacaggacagtattcacctcacagtatt
gttgatttgagcccagaagaaatggcaagtgatgaaaggcaaaaggagaacaagaagatc
aaagaaaaagctttatttaatagccagcttggaggtcctcccaaggccagcacagataag
tttaagtgtggtaggtgcgggaaaaatcagaccacctactaccagatgcaaactcggagt
gctgatgaaccaatgacaacctatgtcacatgtgtaaactgtgataatcgctggaagttc
tgttaa
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