Solanum lycopersicum (tomato): 101254991
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Entry
101254991 CDS
T02665
Name
(RefSeq) F-box protein SKP2B
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101254991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101254991
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101254991
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_Zer-1
LRR_8
Motif
Other DBs
NCBI-GeneID:
101254991
NCBI-ProteinID:
XP_004237708
UniProt:
A0A3Q7G362
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Position
4:56990008..56993474
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AA seq
364 aa
AA seq
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MIGVEDLSLDKLFVNNGSRGGVCKMGGGAMIREWKDIPMELLLRIASLVDDRSVILASCV
CSGWRDAISWGLTRLSLSWCKRNMNNLVLTLAPKFTKLQVLTLRQDLPQLEDVGIETIAN
HCHELQDLDLSKSFKLTDRSLYALAHGCPNLTKLNISGCSAFSDNAVAYLAERCRNLRVL
NLCGCVKAATDQALKAIGYYCNRLQTVNLGWCDKVGDEGVMSLAYGCPDLRALDLCGCVL
ITDETVIALANNCPHLRSLGLYFCQYITDRAMYSLAQSRVKNKHEMWASMKKHRNEDEGL
MNLNISQCTALTPPAVQAVCEAFPALHTCPERHSLIISGCLNLTSVHCACSVQAHRARVL
HPAH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgataggggtagaagatttgagcttggataagctgtttgtgaacaatggtagcagaggt
ggggtttgtaaaatggggggtggggcgatgatcagagagtggaaggatatacctatggag
ttgttgttgaggattgcttcacttgtggatgatcgctcggtgattctggcttcttgtgtt
tgtagtggatggagagatgcaatttcttggggactcactcgtctttccctttcttggtgc
aagaggaatatgaacaatttagtgctgacacttgcccccaagttcacaaagctgcaggtt
ctaactctaagacaagatttaccacaacttgaggatgttggtatcgagacaattgccaat
cactgtcatgaattgcaagaccttgatcttagcaagagtttcaagctgactgatcgttcc
ctttatgctttagctcacggctgtccaaacctcacaaagctgaatatcagtgggtgttct
gctttcagtgataacgctgttgcatacctagctgagcgttgccgaaacctaagagtctta
aacctttgtggttgtgttaaagctgcaactgatcaggcattgaaggctattggttactac
tgtaaccgactgcagactgtaaatcttggttggtgcgataaagttggtgatgaaggtgta
atgagtttggcttatggctgtcctgatctcagagcccttgatctgtgtggctgtgtcctt
ataacagatgagaccgtgattgctttggcaaacaattgccctcacttgaggtccctcggc
ctatacttctgccagtacatcacagatagggcaatgtactctctagctcagagtcgggtc
aagaacaagcacgagatgtgggcgtctatgaagaagcacaggaacgaggatgaagggctt
atgaatctaaacatcagccaatgcactgctctcacacctcccgccgttcaagcagtatgt
gaagcatttcctgctctgcacacatgccccgagcgacactctctcatcatcagcggatgc
ctgaacttaacctctgtgcattgtgcgtgctctgtccaagctcaccgtgcacgagttctc
catccagctcactga
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