Solanum lycopersicum (tomato): 101255259
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Entry
101255259 CDS
T02665
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101255259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sly03009
]
101255259
03032 DNA replication proteins [BR:
sly03032
]
101255259
Ribosome biogenesis [BR:
sly03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
101255259
Prokaryotic type
101255259
DNA replication proteins [BR:
sly03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
101255259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
PUA_elF2D
UPF0113
Motif
Other DBs
NCBI-GeneID:
101255259
NCBI-ProteinID:
XP_004232632
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All DBs
Position
2:61809429..61811790
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AA seq
587 aa
AA seq
DB search
MTDVELSRSEKKKKKSKSGKNDDETQTLSTPIDGDFLIKPQSYTPTIDTSEWPILLKNYD
RLNVRTGHYTPLPSGFSPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVEKTGH
SGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSDVPDVAKVARALEALTGAV
FQRPPLISAVKRQLRIRTIYESKLLEYDAERHLVVFWISCEAGTYVRTLCVHLGLLLGVG
GHMQELRRVRSGILGEKNNMVTMHDVMDAQWMYDNYRDETYLRRVIMPLEVVLTSYKRLV
VKDSAVNAICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMGTCDH
GVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPAEWTRNVVLST
KEDTLVAGLAAATVKSDPDAVAADGAAVEVEKKKKKHKEDDEDANKRKLDDLDVSPAPSA
LKKPKVEVVEEALDKSELKKEKKKKKKKEADEAASPDVESVKKEKKKKDKENNDVASSDE
EKSEKKKKKKKKDKESENGDVGSDDEGSKSKKKDKKKKKNKDDAQEE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgttgagctctctcgctcagagaagaagaaaaagaaatcaaagtctggcaaa
aatgatgacgaaacacaaacactatccaccccaattgatggtgattttctcatcaaacct
caaagctacacacccaccattgacacttcagaatggccgattctattgaaaaactacgat
cgtctcaatgtcagaacgggtcactacactcctctcccatctgggttttctccattgaag
cgtccgcttgctgagtatataaggtatggtattcttaatcttgataaacctgctaaccca
tcttcacatgaagttgtagcttggattaagaggattcttcgggtcgagaaaacgggtcat
agtggtactttggatcctaaagttactgggaatttgattgtttgtattgatagagcgacc
cgtttggttaaatcccaacagggtgcgggtaaagagtatgtgtgtgttgctaggttgcat
tctgatgtacctgatgttgctaaggttgctagggcacttgaagctcttactggggctgtt
tttcaaagaccccctttgatttctgctgtgaaaaggcagcttaggattaggactatttat
gaaagtaagttgcttgagtatgatgctgaaaggcatttggttgttttttggatatcctgt
gaggcgggtacttatgttaggacattgtgtgttcatcttgggttgcttttgggtgtgggt
ggacatatgcaggagcttaggagagtgaggtctgggattttgggtgagaagaataatatg
gtgacaatgcatgatgtgatggatgcacaatggatgtacgataactatagggatgagact
tacttgaggagggtcattatgccgttggaggtagttttgactagttataagaggttggtg
gttaaggattcggcagttaatgctatttgctatggtgcaaagttgatgattcctgggctt
ttaagatttgagaatgatattgaggttggagaggaggttgtgctgatgactactaagggg
gaggccatcgcgttggggatagcagagatgaccacagctgttatgggaacttgtgatcat
ggtgtggttgcaaagattaagagagtggtgatggatagggatacttatcctaggaaatgg
ggcttaggaccaagggcttcaatgaagaagaagttggttgctgagggtaagttggataaa
catggtaagccaaatgataaaactccagctgagtggacgagaaatgttgttttatctacc
aaagaggatactctagttgctggtcttgctgctgctactgtgaaatctgatcctgatgca
gtggctgctgatggtgctgcagttgaggttgagaagaaaaagaagaaacacaaggaagat
gatgaggacgctaacaagagaaaattggatgatttagatgtatcccctgcacccagtgct
ttaaagaaaccaaaggtagaggtagtcgaggaagcattggataagtctgaactgaaaaaa
gaaaagaagaagaaaaagaagaaagaagctgatgaagctgcatcccctgatgtggagtct
gtgaaaaaggaaaagaaaaagaaggacaaagagaataacgatgttgcatcctcagatgag
gagaagtccgagaagaagaaaaagaaaaagaagaaagataaagaatcagagaatggtgat
gttggaagtgacgatgaaggaagtaaaagcaagaagaaggataagaagaaaaagaagaat
aaagatgatgctcaagaggagtag
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