Solanum lycopersicum (tomato): 101255309
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Entry
101255309 CDS
T02665
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101255309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101255309
03012 Translation factors [BR:
sly03012
]
101255309
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101255309
Translation factors [BR:
sly03012
]
Eukaryotic type
Release factors
101255309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
101255309
NCBI-ProteinID:
XP_004242634
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All DBs
Position
7:2574447..2578528
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AA seq
437 aa
AA seq
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MADSHDNDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIITEDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEVLANVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKVLEMGAIETLIVWENLDINRYVLKNNTSGETIIKHLNKEQDTVQSNFRD
PDTNAELEVQDKLSLLEWFANEYRKFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDV
RAFDELSDDGEVYEDSE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagtcacgataatgataagaatatcgagatatggaagatcaagaaacttata
aaggcactcgaagctgctcgaggcaatggtaccagcatgatttctctaatcatgcctcca
cgggatcaagtatctagggtcactaagatgcttggagatgagtttggaactgcgtcaaac
atcaaaagtagagtgaatcgtcaatctgtgctgggtgcaatcacatctgctcagcagaga
cttaaactctacaataaggttccaccaaacgggcttgtgctttataccggaacaatcata
actgaagatgggaaagagaagaaggttacaattgattttgagcccttcaggcccattaac
gcttctctatatctttgtgataacaaattccatacagaagccctgaatgaacttctggaa
tccgatgacaagttcgggttcattgtgatggatgggaatgggacactttttgggacattg
agtggcaataccagggaggtccttcacaagtttagtgttgatctgcccaaaaaacatgga
agaggaggtcagtctgcactgcgttttgctcgtcttcggatggagaaacgtcacaactat
gtgaggaaaacagccgaacttgcaacccaattttatattaatcctgctaccagccagccc
aatgtttcaggcttgatattagctggatcagctgactttaagacggagcttagccagtct
gatatgtttgatcctcgtcttcaggcaaagattttaaatgtggtcgatgtttcgtatgga
ggggagaacggtttcaatcaagcaattgagctgtctgccgaggtcttggccaatgtgaaa
tttatacaagagaagaaattgataggtaagtattttgaggagatcagtcaggacaccggg
aagtatgtttttggggttgatgataccttgaaggttctggaaatgggtgctattgagacc
ttaattgtgtgggaaaatctagacattaataggtatgtgctgaaaaataacacctccgga
gaaacaatcatcaagcacttgaacaaggagcaagacactgtccaaagtaacttccgtgat
cctgatacaaatgctgaattagaagttcaggataaattgtcattacttgagtggtttgcg
aatgagtacaggaaatttggttgtagtttggagttcgttaccaataaatcacaggaagga
tctcagttttgccgtggttttggtggcattggaggaattctccgttaccagcttgatgtt
agagcttttgatgaactttctgatgatggtgaagtttacgaagactctgaatag
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