Solanum lycopersicum (tomato): 101255326
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Entry
101255326 CDS
T02665
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A isoform X1
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101255326
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101255326
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101255326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
zf-Nse
Motif
Other DBs
NCBI-GeneID:
101255326
NCBI-ProteinID:
XP_010315819
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All DBs
Position
1:1728897..1734594
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AA seq
342 aa
AA seq
DB search
MDDELKKGESHITSAAAFVEGGIQDACDDACSICLEAFCDSDPSTLTSCRHEFHLQCILE
WHQRSSNCPMCWQPLSLKDPTSQELLEAVEQERTIRFNQARNATMFRRPTLLTTGMSESE
LEERIIQHLAAAAAMGRGHHFGQREGSRNRPSPHGRPHFLVFSSHPDPSPTAAAESDSRQ
AIADPSVPITPVRHETAQFLPHLSSGQSNQLSASSSRYVRPQTVKQEISVGDRSSSGPSL
TENEDTEGPSDLLHSLSESWKSRFNSMSMKYRESISKSTRGWKERLFSRSTSMGQLETRE
NNTDNNIPSNVEQRHNDDMVAHNGSRLNGNNSTTSSASSARN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgagctcaagaaaggggagagtcatatcacatcagctgcagcttttgtggaa
ggaggaattcaagatgcctgtgacgatgcgtgcagcatttgtctggaagctttctgcgat
agcgatccttcaacgctaacaagctgcaggcacgagtttcacctccagtgcatcctcgaa
tggcatcaaagaagttctaattgtccaatgtgttggcagcccctaagtctgaaagatcct
acaagtcaagaattgcttgaggcagtggaacaagagaggactattaggtttaatcaggca
agaaacgctacgatgtttcgtcgtcctacgctgttgaccacgggtatgagtgagtctgaa
ctcgaagagcgcattattcagcatttggctgctgctgcagcaatgggacggggacaccac
tttggtcaacgagagggatcaagaaatcggccatctccccatggtcgtccgcatttttta
gtgttttcatctcatcctgatccatctcctactgctgctgctgaatcggattctcgtcaa
gctatagctgatccttctgttcctataacacctgtccgccatgagactgcacagttcttg
cctcacctctcatctggtcaaagtaatcaactttctgcttcatcatctcgatatgttcgc
ccacaaaccgttaaacaagaaatatctgttggcgatagaagctcttctggtccatctttg
acagaaaacgaggataccgaaggaccatcagaccttcttcattcattatcggaatcctgg
aaatctcgatttaattcaatgtcaatgaaatatagagaatcaatctcaaagagtacacgc
gggtggaaagagagattgttttctcgaagtacttctatgggacagctcgagacacgggaa
aataacacggacaacaacataccttcaaacgttgagcagagacacaacgatgatatggtt
gctcataacggaagcagattgaacggaaataattctacgacttcctccgcgagttcagct
cggaattaa
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