Solanum lycopersicum (tomato): 101255344
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Entry
101255344 CDS
T02665
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial isoform X2
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101255344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sly03400
]
101255344
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
101255344
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
101255344
Prokaryotic type
101255344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
101255344
NCBI-ProteinID:
XP_004231528
LinkDB
All DBs
Position
2:complement(37140508..37153160)
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AA seq
320 aa
AA seq
DB search
MASSSSKTLKDLWKQPAAKRLKQVSSTENFISSALASSSSRKDCDEDPKDVVSSTPEQNS
RMEFNRSLAKSKRNLKLCSDKISKLNANGEGGGYVKLQELLIEETWLEALPGEFEKTYAG
NLCKFVEKEISGGVPIYPPLHLIFNALNTTAFDRIKAVIIGQDPYHGPGQAMGLSFSVPK
GVKVPSSLLNIYKELKQDLGCSIPLHGNLEQWAVQGVLLLNAVLTVRHHQANSHANKGWE
QFTDAIIKTISKKKEGVVFILWGNYAQAKARLVDETKHHILKSAHPSGLSANRGFFGCRH
FSQTNQLLEKMGMPPIEWQL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcttcatccaaaaccctaaaggacctatggaagcaaccagcagcaaagcgt
ctaaaacaggtgtcttctaccgaaaacttcatttctagcgccttggcatcttcatcttcg
cgtaaagactgtgacgaagaccccaaagacgtagtgtcctcaacgccggagcaaaattcg
agaatggagttcaaccgatcactcgcaaagtccaaacggaacctcaaactatgttctgat
aaaatctccaaattaaacgcaaacggtgaagggggtggatacgtgaagttacaggaactg
ttgattgaggagacatggttggaagcattgccaggggaatttgagaagacctatgcaggg
aacttgtgcaaatttgtggaaaaggaaattagtggtggtgtcccaatttatcctccacta
catctgatttttaatgctcttaacactactgcatttgacaggataaaggctgtcattatt
ggacaggatccatatcatggaccaggtcaggcaatgggcctgtctttctcggtgcctaag
ggtgtgaaagtcccttctagtctgttgaatatatataaagaacttaagcaagatttgggc
tgttcaataccacttcatggaaatctggaacaatgggctgtgcagggcgttctgcttctc
aatgctgttctaacagtcaggcatcatcaggcaaattcacatgcaaataaaggctgggag
caatttacagatgctatcatcaaaacaatttctaagaagaaagaaggagttgttttcatt
ctatggggaaactatgcccaagcaaaagccaggttagttgatgaaacaaagcaccatatt
ctcaaatcagcacacccttctggattgtctgcaaacagaggtttctttggatgccggcat
ttttcacagacaaaccaacttttggaaaagatgggaatgcctcccattgaatggcaacta
taa
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