KEGG   Solanum lycopersicum (tomato): 101255522
Entry
101255522         CDS       T02665                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101255522
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sly03019]
    101255522
   03041 Spliceosome [BR:sly03041]
    101255522
Messenger RNA biogenesis [BR:sly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     101255522
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101255522
Spliceosome [BR:sly03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    101255522
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 101255522
NCBI-ProteinID: NP_001309142
LinkDB
Position
1:complement(3358879..3363573)
AA seq 488 aa
MAKKRKTRASEPSQPAEEPVEIKQEPEVEPAQEEEYENDAVEVEEEEAVHEDEEEQDPEE
EEEEGGEDDEEEEETPGSGNDAVEGDNEKSEQVNGGGAEVKIEEGNEEDLEDEPLENLLE
PFTKDQLTALIKEALAKYPDFKENIQKLADKDPAHRKIFVHGLGWDTTAETLTSVFGSYG
EIEDCKAVADKVSGKSKGYGFILFKHRSGARKALKEPQKKIGTRMTSCQLASAGPVPAPP
PSTAAAPVSEYTQRKIFVSNVAADLEPQKLLEYFSKFGEVEEGPLGLDKQSGKPKGFCLF
VYKTVEGARKALEEPHKTFEGHTLHCQKAIDGPKHSKNFHQQQQPQSQQHYPQHHHHHNQ
QQHYYQHPAKKGKYSGSSAGSAGHLMAPSGPAPVGYNPAVAAVTPALGQALTALLATQGA
GLGIGNLLGGLGGPVSHQGVQPVVNSATGYGAQGGYGAQPHMPYQNPQMQGGARPQGGGA
PYSGYGGH
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgaagaagcgaaaaaccagagcttctgaaccttcacaaccagctgaagaaccagta
gagattaagcaagaacctgaggttgaacccgcacaagaagaagagtacgagaacgatgct
gtagaagtagaggaagaagaagcagtacatgaggatgaagaagaacaagatcccgaagaa
gaagaggaagaaggcggtgaagatgatgaggaagaagaagaaacgcctggatctggaaat
gacgccgtagagggtgataatgaaaagtcggagcaagttaatggaggcggcgctgaggtg
aagattgaggaaggtaatgaagaggatttggaagatgagccacttgagaatctgttagaa
ccctttacgaaggatcaacttacagcgcttattaaagaagctttagctaaataccctgat
ttcaaagaaaatattcagaaattggctgataaagatccggcacaccggaaaatctttgtt
catggtttaggttgggatacaacagctgaaacgctaactagtgtttttggaagttacggt
gaaattgaggattgtaaagctgttgccgataaggtttcagggaaatcgaaaggttatggg
tttatattgtttaagcataggagtggtgctaggaaagctttgaaggagccacagaagaag
attggtacaaggatgacttcttgccagttggcttctgctgggccggttccggctcctcca
ccttctacagcagccgcaccggtttcggagtatacacaaaggaagatttttgttagcaat
gtagctgctgatcttgaacctcagaagctgttggagtacttttcgaagtttggtgaagtt
gaggagggtccacttggattggataagcaaagtgggaaacctaaggggttctgtttgttt
gtgtataagactgttgagggtgctaggaaggcattagaggagccacataagacctttgaa
gggcatacccttcattgtcagaaggcaattgatggaccgaagcatagtaagaattttcat
cagcagcaacagcctcagtcacaacagcattaccctcagcatcatcatcatcataatcag
cagcagcattattatcagcatcctgcaaagaaggggaaatattcaggtagcagtgcagga
tcagctgggcatctgatggcaccatcggggcctgcacctgtgggatacaatcctgctgtg
gcagctgtgaccccagctcttggacaggcactgacagcgctgttagctacacaaggagct
ggtttggggatcggtaatttgcttggaggtcttggtgggccagtgagtcatcagggtgtg
caaccagtggtgaacagtgcaacaggatatggtgcccagggtggatatggagctcagcct
catatgccataccaaaacccacagatgcagggtggtgcaagaccacaaggtggtggtgca
ccatactctggctatggaggtcactag

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