Solanum lycopersicum (tomato): 101255562
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Entry
101255562 CDS
T02665
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 2-like
KO
K12184
ESCRT-I complex subunit VPS28
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101255562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101255562
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101255562
Membrane trafficking [BR:
sly04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
101255562
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101255562
Exosomal proteins of other body fluids (saliva and urine)
101255562
Exosomal proteins of colorectal cancer cells
101255562
Exosomal proteins of bladder cancer cells
101255562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
SHOCT
Motif
Other DBs
NCBI-GeneID:
101255562
NCBI-ProteinID:
XP_004234483
UniProt:
A0A3Q7G4G7
LinkDB
All DBs
Position
3:5481836..5485550
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AA seq
209 aa
AA seq
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MEVKLWNDKREREMYDNLAELFAIIKATEKLEKAYVRDIISAAEYETESQKLIAQFKTLS
STLRDTVPNIERFHDTYKMDCPAALNRLVTSGVPATVEHRAAAAMSSVSSAAVVAECVQN
FITAMDSLKLNMIAVDQVYPLLSDLSSSLNKLSILPVDFEGKTKMREWLSRLSKMGAADE
LTEQQARQLHFDLESSYNSFMASLPTDGS
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggaggttaagctatggaatgacaagcgtgaaagagaaatgtatgacaacttagctgaa
ctctttgctattatcaaagcaacagagaagctagagaaggcttatgttcgtgacatcatt
tcagcagctgaatatgagactgagagtcagaaactcattgctcagttcaaaaccctatca
tctacattaagggatactgtacctaacattgagcgatttcatgacacatacaaaatggat
tgccctgctgccctaaaccggcttgtgacctctggcgtgccagctactgtagaacaccga
gctgctgctgcaatgtcatctgtgagttcagcagctgttgtggccgaatgtgtgcagaat
ttcatcactgcaatggactcgttaaagttgaacatgattgccgtagaccaggtctatccc
ctattatcagatctgtcatcttccctcaataaactatcgattctgccagtggattttgaa
gggaagacaaagatgagagagtggctttcaagactgtcgaagatgggggctgcagatgag
ttgacagaacaacaggctcgccagctccacttcgatctggaatcgtcatacaattctttc
atggcatcacttcccactgatggaagttag
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