Solanum lycopersicum (tomato): 101255628
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Entry
101255628 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X1
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101255628
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101255628
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101255628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-RING_5
zf-RING_16
zf_RING_Vps8
DUF7413
zf-C3HC4_3
RINGv
TonB_C
FANCL_C
zf-UDP
Motif
Other DBs
NCBI-GeneID:
101255628
NCBI-ProteinID:
XP_004229910
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All DBs
Position
1:complement(82277395..82285740)
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AA seq
591 aa
AA seq
DB search
MVGGNTFAKTICSICFEDLKPVVEDLQSISLCGHVFHELCLQQWFEYCTNGKKKNCPVCK
QTCTEKNTHRLFFQSVGDPNDPSLSQQPHDVEGGPPCELQNEVKRLEGKVLKLASTLEQQ
QKDIKEVNAELLSCKEQLKVEVALKNEAKKQKTASQQLLHVKSQELDQSTLECRRLQERS
MALAKELAALKLVCDVNLGEEEVLKLASLGNQANSKETIDVLKKSLVIRNKSYKELMTKC
NTLGRAEARSLSKLEKAIEKIDKLKARVQELEMAVEARDNENLRTLRASKNFEVESGKDV
SKELTAVKCSNENQKKELADTAVHLHPVTGYGHDSRRGEKRKVMFSDVSEKDTTDRIITS
CLDQDNQEKTPFQENKDGGIFETSSCMHQVSNRKLNPLVNHKKAVHENILSRLKVSSGTA
DATQVKASYNKYELSGLKNCGKNSAVNMSPVTILDDDDLLPIKDFTQGEPSFHIRKGTSA
PTSLAEIGDHCFSGGLLGPDGTNRHLGKWCKKVQNKGSTGLQGSGANSGDLISVGADGRG
GRIKVLRSINQASLDKESTESIKRCKSGTKTGSSQSQGCLQIDHFFRRAGQ
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggtaggaggcaacacatttgccaagaccatttgttcaatatgctttgaggatctcaaa
cctgtagtcgaagaccttcaatccatttctctttgtggccatgtctttcacgagctctgt
ctgcagcaatggtttgagtattgtacaaatggaaaaaagaagaattgtccagtttgcaaa
cagacttgtacagagaaaaacacacataggcttttttttcaatcagttggtgatccaaat
gatcctagtctttcccagcaaccacatgacgttgaagggggacctccctgtgaattacaa
aatgaggtcaaaaggttagaggggaaagtcttaaaactggcttctaccctggaacagcaa
caaaaagatatcaaagaagttaatgctgagttgctcagttgcaaagagcagttgaaagta
gaagtggctttaaagaacgaagctaaaaaacagaagacagccagtcagcagttacttcat
gtaaaatctcaggagcttgatcaatcaaccttggaatgcagacgactgcaagaaagaagt
atggccctagctaaagagctggcagcactcaagctagtctgtgatgtgaacttgggggaa
gaagaagtcctgaagcttgcttcattgggcaatcaggccaacagtaaagagacgattgac
gtcttgaaaaagtcactggtcatccgtaacaagagttacaaagaattgatgaccaagtgc
aacacccttgggagggcggaggcgcgttctcttagtaagcttgagaaggctatagagaag
atagataagctcaaggcaagggtccaagagcttgagatggctgttgaagcaagagacaat
gaaaatttgagaactttgagagcttccaagaactttgaagttgaatctggaaaagatgtt
agtaaagaactgacagctgtcaaatgctcaaacgagaatcagaaaaaggaacttgccgat
acagcagtgcatttgcatccggtcactggctatggtcatgattctcgtcgaggggaaaaa
cggaaggttatgtttagtgatgtgagtgaaaaagataccacagatcgtatcataactagt
tgtcttgaccaagataatcaggagaaaaccccttttcaggaaaataaggatggtggcatt
tttgagacttccagttgtatgcatcaagtatcaaatcgaaaactgaatccactagttaac
cataagaaggcagtccatgagaatattttatcaagattgaaggtaagttcggggactgca
gatgcaactcaagtaaaggcatcatataacaagtatgaactctcaggcttaaagaattgt
ggcaagaacagtgcagtaaacatgtcacctgtaactattctcgatgatgatgatcttctc
cctataaaagactttactcagggtgagccctcatttcacattagaaaaggaacttcagct
ccaacttcacttgccgaaataggagaccattgcttctctggtggattattaggccctgat
ggaacaaacaggcacttgggaaaatggtgtaagaaggtccagaacaagggatctacaggg
ttgcaaggatcaggtgcaaattcaggtgatttgatttctgtgggagctgatggcagaggt
ggtaggattaaagttctccgatctataaatcaggcctctctggacaaggagagtacagaa
tcaataaagagatgcaagtccggcacgaaaacaggtagttcacagtctcaaggatgcttg
caaatagatcatttcttcagaagggctggtcaatag
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