Solanum lycopersicum (tomato): 101255649
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Entry
101255649 CDS
T02665
Name
(RefSeq) ubiquitin C-terminal hydrolase 12 isoform X4
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101255649
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sly01002
]
101255649
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101255649
Enzymes [BR:
sly01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101255649
Peptidases and inhibitors [BR:
sly01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101255649
Ubiquitin system [BR:
sly04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101255649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
101255649
NCBI-ProteinID:
XP_004249927
LinkDB
All DBs
Position
11:complement(1622835..1644410)
Genome browser
AA seq
1116 aa
AA seq
DB search
MTLMTPPPVEPEDEEMLVPNSDFPVEGPQPMEVATADTASTVEGPQVDDPPSGRFAWTIE
KFSRLNVKKLYSEVFNVGGYKWRILIFPKGNNADQLSLYLDVADSPSLPYGWSRYAHFSL
GVLNQAHTKFTVRKDTQHQFNARESDWGFTSFMPLSELYDPSRGFIMDDTVIVEADVSVR
KVADYWSHDSKKETGCVGLKNQGATCYMNSLLQTLYHISYFRKAVYHMPTTENDNPSGSI
PLALQSLFYKLQYSDTSVATKELTKSFGWDSNDSFTQHDVQELNRVLCEKLEDKMKGTVV
EGTIQQLFEGHHMNYIECINVDYRSTRKESFYDLQLDVKGCRDIYASFDKYVEVERLEGD
NKYHAEKYGLQDARKGVLFVDFPPVLQLQLKRFEYDFARDTMVKINDRYEFPLQLDLDRE
NGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDPK
RALEEQYGGEEELPHTNPAFNNSPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEHL
RVRLKKEQDEKEQKRKEKAEAHLYTIIKVARDEDLGEQIGKEIYFDLLDHDKVRSFRIQK
QMVFTQFKEEVAKVLGIPVQFQRYWLWAKRQNHTYRPNRPLTPQEEVQSVGQLREVSNKT
SNAELKLYLEVEVGLDLQPCPPPEKTKEDILLFFKLYDPLKEEIRYVGRLFVKGSGKPLD
ILSKLNELAGFSPDEEIELFEEIKFEPNVMCEPIDCNLTFCSSQLEDGDIICFQKPVRSQ
TSEQCRFSDVPSFLEYVHNRQVVHFRSLEKPKEEDFSLELSKLNTYDEVVESLARHLRLD
DPSKIRLTSHNCYSQQPKPQPIKYRGVDRLTEMLVHYNQTSDILYYEVLDIPLPELQCLK
TLKVAFYNAAKYEVTIHTIRLPKQSTVDDVLNHLKTKVELSRPDAELRLLEVFYHKIYKI
FPPTERIENINDQYWTLRAEEIPEEEKNLGPLDRLIHVYHFTKDTTQNQAHVQNFGEPFF
LVIHEGETLAEVKVRIQRKLQVPHEEFSKWAFAFVSMGRPDYLRDSDIVSIRFQRRDVYG
AWEQYLGLEHADNGPKRSYASNQNRPTFDKPVRIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatgactcctcctccagttgaacctgaagacgaggagatgcttgttcctaat
tcagattttcctgtagaaggtccgcagcctatggaagttgcgactgcggatacggctagt
acggtggagggtccacaagtggatgatccgccatctggtaggtttgcgtggacgatagag
aaattttcgaggttgaatgtaaagaagctatactcggaagttttcaatgtgggaggatat
aaatggaggatcttgatattccctaaaggtaacaatgcggaccaattgtcattgtatttg
gatgttgccgattcaccgtcattgccttatggttggagtagatatgctcattttagctta
ggtgtgctcaaccaagctcataccaagtttacagtgaggaaagacactcagcaccagttt
aatgcaagggagagtgactggggtttcacatctttcatgcctttaagtgaattatatgat
cccagcagaggttttattatggatgatactgttattgttgaagctgatgtttctgttcgt
aaggttgctgattactggtcccatgactctaagaaggagactggttgtgttggccttaag
aatcagggagccacttgttatatgaactctctcctccaaacattgtatcatatttcttac
tttagaaaggctgtgtatcatatgccaacaactgagaatgacaatccatctgggagcatc
cctttggctttgcagagtctgttctataagctacagtacagtgacactagtgtagcaaca
aaagagttgacgaagtcctttggatgggactcaaatgattctttcacgcagcatgatgta
caagaacttaacagggttctttgtgaaaaacttgaagataaaatgaagggaacagttgta
gagggaacaatacaacaactgttcgaggggcatcatatgaattatattgaatgtatcaat
gtggattacagatcaacaagaaaagaatctttttatgacttgcagcttgacgtcaaaggg
tgtcgtgatatctacgcttcttttgacaagtatgttgaagtagaacgtcttgagggtgac
aataaataccatgcagaaaaatatggtttacaggatgctcggaaaggtgtcctttttgtt
gacttcccccctgttcttcagcttcagttaaaacgttttgaatatgattttgcacgggat
actatggtcaagataaatgacagatatgagtttcctttacaactcgaccttgatagagag
aatggaaaatatttatctccagatgctgatcgaagcgttcggaatctctatactcttcat
agtgttttggttcacagtggtggggtccatgggggacactattatgcttatatcagacca
acgctctctgatcaatggtttaaatttgatgatgagcgtgtgacaaaagaagatccaaag
agggctctggaagagcagtatggtggtgaggaggagttgcctcatacaaaccctgcgttc
aacaattcaccattcaaattcacaaaatattcaaatgcatatatgcttgtttatattcgt
gaaagtgacaaagaaaagattatctgcaatgtggatgaaaaggacattgcggagcatctc
agggtaaggctaaagaaagagcaagatgaaaaggagcaaaagagaaaggaaaaagcagag
gctcacctttatactatcatcaaggttgctcgtgatgaagaccttggtgaacaaattggg
aaggagatttattttgatcttttggatcatgacaaagtccgtagtttccgtatccagaaa
cagatggtatttacgcaattcaaggaggaggttgctaaggtattgggtatacccgttcaa
ttccagcggtattggctatgggcaaaacgacaaaatcacacatatcggcctaatcggcca
ttgacacctcaagaggaagttcagtcggttggacaattgagagaggtctctaataaaaca
agtaacgcggagctaaagctttatttggaagttgaagttggcctggatttgcaaccttgt
cctccacctgagaagaccaaagaagatattcttctatttttcaaactgtatgaccctcta
aaagaggagataaggtatgttgggcggctctttgtaaaaggaagtggcaagccactggac
atattgtccaagctaaatgagttggctggattttcacctgatgaagagattgaactcttt
gaggaaataaaatttgaacccaatgtaatgtgtgaacctattgattgcaatctaacattt
tgtagcagtcagcttgaagatggggacattatttgcttccagaaacccgttcggagtcaa
actagtgaacaatgtcgattttctgatgttccttcatttttagagtatgtgcacaatcgc
caggttgttcacttccgctcattggaaaaacccaaggaggaggattttagtctcgagttg
tcaaagctgaacacctatgatgaagtagtagagagtttggctcgccatctccgcttggat
gacccatctaaaataaggcttacatcacataactgctactcacagcagccaaaacctcag
ccaataaagtatcgaggagtggaccgtcttacagaaatgctggttcactataatcagact
tcagacattttgtattatgaagtcctcgatattccattaccagagctacagtgcttaaaa
actctcaaagtcgccttttataatgctgcaaaatatgaagtgacaatccatactattaga
ttgccaaaacaaagtactgtggatgatgtccttaatcatcttaagacaaaggttgagttg
tcacgtccagatgctgaactaaggttgctggaagttttctatcacaagatatataagatt
tttccacctactgaaaggattgagaacataaatgatcagtactggaccttgcgtgcagaa
gagatccctgaagaggagaaaaacctgggtcctcttgatcgtttgattcatgtttaccat
tttacgaaggacacaactcaaaaccaagcacatgtacaaaactttggcgaaccatttttt
ttggttattcatgagggtgagacactggctgaagttaaagtgcgcattcagagaaaattg
caggttccacatgaggagttttcaaagtgggcgtttgcgtttgtgtccatgggccgtcct
gactacctccgggattcagatattgtatctattcgttttcagaggagagatgtttatggt
gcttgggagcagtatctgggattagagcatgctgacaatggtcctaaaaggtcatatgct
tccaaccagaatcgacccacttttgacaagcctgttcggatctacaactag
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integrated database retrieval system
