Solanum lycopersicum (tomato): 101255746
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Entry
101255746 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12586
exosome complex component RRP43
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101255746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101255746
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101255746
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH_C
RNase_PH
Motif
Other DBs
NCBI-GeneID:
101255746
NCBI-ProteinID:
XP_069146320
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Position
10:60667941..60676754
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AA seq
216 aa
AA seq
DB search
MNPCSHQKILELNYHPINHASIPLVGGLPYERSKSIPLFSVCSGMIDLKELCLVGGKAAW
MAYLDIYCLDADGASFDTALLSAVAAFLHLNIPVVSLNDDGRIVLVSEDTVRLKLEKEPV
NTEKRKLKLNSLPFSLTCILHKNYILADPTAEEESIMETIVTVVLDTSYQLVSLNKPGGP
VLSHTSVIQDCVALARRRVKELQSVLNEAISDMEVD
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttgctctcaccagaagattttggaacttaattatcatccaatcaaccatgcc
tcaatcccactagttggcggtctgccatatgaaagatctaaatccattcctctgtttagt
gtttgttctggcatgattgacttaaaagagttgtgcttggttggaggaaaagctgcttgg
atggcctacctggacatatactgtttggatgctgacggtgcctcgtttgacactgcatta
ctatctgcagttgctgcctttttgcatttgaacattccagtagtgtctttgaatgatgat
gggcgaatagtccttgtttctgaggacactgtccggttgaaattggagaaggaacctgtg
aatacagagaaaagaaaactcaaattgaactctctaccattctccttaacatgcatactt
cacaagaactacatcctcgcagatcctacagcagaggaagaatctataatggaaacaatt
gtaaccgtggtactggatacgtcttaccagcttgtttcacttaataaaccaggtggacca
gttctttcccatacatcagttatccaggattgcgttgcactggcaagacgcagagtgaag
gagcttcagagtgtcttgaatgaagctatttctgatatggaggtagactga
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