Solanum lycopersicum (tomato): 101255760
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Entry
101255760 CDS
T02665
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sly03036
]
101255760
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
101255760
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_EML
eIF2A
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
101255760
NCBI-ProteinID:
XP_004251044
UniProt:
A0A3Q7J021
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Position
11:complement(58356501..58365534)
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AA seq
1074 aa
AA seq
DB search
MIAEKPTWIRHESMQIFSIDIQPGGLRFATGGGDHKVRIWNMKCVGKDLEADESTPKLLA
TLRDHFGSVNCVRWAKHGRYVASGSDDQVIQVHERKPGSGTTEFGSGEPPDVENWKVTMT
LRGHTADVVDLNWSPDDSTLASGSMDNTIHIWNMSNGICSAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTEGHWAKSLGSTFFRRLGWSPCGHYITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPIIVVKFNHSMFRRNLANAQEVKNASLGWSNGSSKSEG
KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFAQSVVDLSWSPDGYSLFACSLDGS
VATFHFDEKELGHQLSDAELEELKRSRYGDVRGRQANLAESPAQLLLEAAAAKQTSSKKL
TTVLPQVQATSKSSVDLGSVVIVPKPQSDNGKKTEGVNSDSLAKPAASTRLSSPVKQREY
RRPDGRKRIIPESVGFPIPLENTSGIAQSPVVEFPNMTVEQRKDDNGMVLSGASVRDGFA
RKTVSVSADQRERSGVTARATISDSLIIEKVPPSACKDGSVGIEQMGIVKDPPHSGTGGT
LLIRVFDNKEGVDIGPICLEAQSREQAANDVLGTGNSFVIKETEILCSRGAQTLWSDRIS
GKVTVLAGNANFWAVGCEDGCIQIYTKCGRRAMPTMMMGSAAVFVDCDESWNFLLVTRKG
SLHLWDLFNRKCLLQDSLASLMNSDPKANAGTIKVITAKLSKSGFPLVVLATRHAYLFDM
SLMCWLRVADDCFPASNFSSSWSSGSLHGGELAALQVDVKKFLARRPGWSRVTDDGVQTR
AHLESQLASALALKSPSEYRQCLLSYVRFLAREADESRLREVCENFLGPPTGMAEAASST
SNKPAWDPCVLGMKKQRLLREDILPAMASNRKVQRLLNEFMDLLSEYEIPDTNLEQSNVA
TTTSTEMNLEQTKVATTTDKMDTDLPMTQRAAPKTLITDPTPSTTVNDRDDPAPPAVQST
EHVEPSTPLKDPMDSAQEGADEAKSVPPPTDQMNLDPPASVESEPFPSPKEKVS
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgagaaacctacttggattagacatgagagtatgcagattttctccattgat
attcagccaggtggtcttaggtttgccactggtggtggtgatcataaggttcggatatgg
aacatgaaatgtgtgggtaaggacttggaagcggatgaatctacaccaaaacttcttgcc
acactacgtgatcattttgggtcagtgaactgtgttagatgggcaaaacatggtcggtat
gttgcttctggctccgatgaccaggtgattcaagtccatgagaggaaacctggctcagga
accacagagtttggtagtggagagcctcctgatgtagagaactggaaagttaccatgaca
ttgagaggacacactgcggatgtggtggatctaaattggtctccagatgactcgacattg
gctagtggtagtatggacaacaccatccatatctggaatatgagcaatggtatatgctct
gctgttctgaggggtcactctagtcttgttaaaggtgtcacctgggatccgattggttca
tttatagctagtcaatcagatgataagactgtcataatttggcgaacaagcgactggagc
cttgctcatagaactgaaggtcactgggcaaaatctcttggatcgaccttctttaggcgt
cttggatggtcaccctgtggacactatataactactactcatggttttcaaaagcctagg
cactctgctcctgttctggagagaggggaatggtctgccacctttgacttcttaggacac
aatgctcctattattgtcgttaagttcaatcattctatgtttcggaggaatttggctaac
gctcaggaagtgaaaaatgcttctcttggatggtcaaatggttcttcaaaaagtgaagga
aaagagtcccaaccctacaatgtcattgctataggaagtcaagatcgcaccataactgtc
tggactacagcaagtccacgtcctctttttgttgccaagcatttttttgctcaaagtgtt
gtggatttatcatggagccctgatggatattcactgtttgcatgttctttggatggaagt
gtagccactttccattttgatgagaaagaacttggtcatcagctatccgatgctgaatta
gaggagttgaagagaagccgctatggtgatgttagaggtcgacaggcaaatttagctgaa
agtccagcacaactgttgcttgaagcagcagctgcaaagcagacttcaagcaaaaaacta
actacggttcttccgcaagttcaagcaacgtcaaaatcatctgttgatttgggtagtgtg
gtgattgttcccaaaccacaatctgataatgggaaaaagactgaaggagttaacagtgat
agtttagctaaacccgcagcttctacacgcttgtcaagtcctgtgaaacaaagagagtac
agaagacctgatggtcgaaagaggataatcccagaatcagttggttttcctatcccactg
gagaacacctctggaattgctcaatctcctgttgttgaatttcctaatatgacagtggag
caaaggaaagatgataatggtatggtactgtctggtgctagtgttagagatggatttgca
aggaaaacagttagtgtcagtgctgatcaaagggagcgctcaggtgtaactgctagagct
accatcagtgatagcctcatcattgagaaggttccaccttctgcatgcaaggatggaagt
gtcggcattgaacagatgggaattgtcaaggatcctcctcattcgggtactggtggtaca
cttttaatcagggtttttgataataaagaaggggtggacattggtccaatttgcttagag
gctcaatccagagaacaagctgccaatgatgttttggggacaggaaattcatttgtaata
aaagaaactgagatactttgttccagaggcgctcaaactctctggtctgaccggatttct
ggaaaagttactgttttggctggaaatgccaacttttgggctgtgggatgtgaagacggc
tgcattcagatttatacaaaatgtggccgacgtgccatgccgaccatgatgatgggatct
gctgcagtatttgttgattgtgatgaatcttggaactttttgctcgtcacaaggaaaggt
tcattacatctttgggatctattcaaccggaagtgtctccttcaagactcgttggcgtcc
cttatgaactcagatcccaaggcaaatgcaggcacaatcaaagtgataacagcaaaatta
tcaaaatctggttttcctcttgttgtcctggccacacggcatgcatacctctttgatatg
agcctcatgtgctggctgagggttgcagatgattgttttccggcttcaaatttttcaagc
tcctggagttcgggctcattgcatggtggtgaactagcggcactgcaggtggatgttaag
aagttcctggctagaagacctggctggagcagagtcactgatgatggggtacaaacacgt
gctcatttggagtctcaattggcgtctgctcttgctttgaagtctcctagtgaatatcgt
caatgccttttatcctacgttcggtttttagcaagagaggcagatgaatcacgcttgaga
gaagtttgcgagaactttcttgggcctcccacagggatggctgaggctgcatcctctacg
tcaaataaacctgcttgggatccttgtgtacttggtatgaaaaagcagagactccttcga
gaagacatacttccagcaatggcctcaaatagaaaagtacagcggctactcaatgagttc
atggatctcctctcagaatatgagatacctgacacaaatcttgaacagagcaacgttgca
accaccacatcaactgaaatgaatctcgaacagaccaaggttgccaccactacagataaa
atggatactgatctccctatgactcaaagagcagcccccaagacactaataactgatccg
acaccttctacaactgttaatgaccgagatgatcctgctcctcctgcagtacaatcaact
gaacatgttgagccttctacaccattgaaagatcctatggactccgctcaagaaggagct
gatgaagctaaatctgtaccgcctccaacagatcaaatgaatttggatccacctgcatca
gttgaatcagaaccatttccgtcaccaaaggaaaaggtttcttga
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