Solanum lycopersicum (tomato): 101255764
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Entry
101255764 CDS
T02665
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101255764
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sly01009
]
101255764
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101255764
Protein phosphatases and associated proteins [BR:
sly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101255764
Spliceosome [BR:
sly03041
]
Common components
Common spliceosomal components
SR proteins
101255764
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_DEAH11
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101255764
NCBI-ProteinID:
XP_019067718
UniProt:
A0A3Q7EYE6
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Position
2:complement(49505199..49512478)
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AA seq
236 aa
AA seq
DB search
MRGFLVSWEMADSPRQRYSRSPSPWEEKSRSGSRSRSRSPPGSYSRPKERSRSRSRSRSR
GREEVSNPGNTLYVTGLSTRVTERDLEEHFSKEGKVKSVFLVMEPRSRISRGFAFITMDS
LEDANRCIKHLNQSVLEGRYITVEKSRRKRARTPTPGHYLGLKNARDDGYRGDRGRYRDR
EDYGYRRSPRHSPYRGGRDYSPRRSPYGEGQEGSVLGHILLMEGAILVVPDRHKPQ
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggttttctcgtatcctgggaaatggctgattctcctcgccaaaggtattcacgc
tctccttctccttgggaagaaaagtcgagatctggatctagatcaaggtctagatctcca
cctgggtcatattcaaggccaaaggaaagatccaggtctagatcaaggtcaagaagccgt
ggaagggaagaagtttctaatcctggaaacacactttatgtgactggattgtctacaagg
gtcacggaaagggacctggaggagcatttctcaaaggaggggaaggtgaaatcagttttt
cttgtcatggagccccgttctcggatttctcgtggttttgcttttataacaatggatagt
ctggaggatgctaatcgttgcattaaacaccttaatcagtcggttcttgaaggccgttac
atcacagtggaaaagtctcggaggaaacgcgcaaggactcctacgcctggtcactatctg
gggcttaagaatgcaagggatgatggttatcgtggagaccgtggcaggtatagagatcgt
gaggactatgggtaccgaagatctccaaggcattcaccatatagaggtggacgagattat
tcacctaggcgttcgccttatggtgaaggtcaagaagggagcgttctaggtcatattctc
cttatggaaggagctatcctcgtggtcccagataggcataagccccagtga
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