Solanum lycopersicum (tomato): 101255831
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Entry
101255831 CDS
T02665
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sly03400
]
101255831
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
101255831
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
AAA_21
CCDC39
ABC_tran
AAA_16
AAA_27
Motif
Other DBs
NCBI-GeneID:
101255831
NCBI-ProteinID:
XP_004229659
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All DBs
Position
1:78400720..78430827
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AA seq
1050 aa
AA seq
DB search
MAERRAKRPKITRGEDDYMPGNITEIELHNFMTFSKLTCKPGSRLNLVIGPNGSGKSSLV
CAIALGLGGEPQLLGRASSIGAFVKRGEESGYIKISLRGETKEDQLTILRKIDTRNKSEW
IFNGKAVPKKNVTDMIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPRLP
VQHVDLISKSEELKKSERTVKSGRETLDQLKEVNSQLERDVERLRQREQLLGQAETMKKK
LPWLKYDAKKAEFLEAKRQEQDAKKKLDEAAENLNELMEPIEEKKQEKAERDAKCKKVNG
LLGDNANKRMKLLDQDSRLDVQVNGKYKEMEDLRKQEESRQRRISKAQEDLSAAELELAN
LPSYEPPRGKIDSLGSKILELQDGARELRSQKSEIERTLDRNRTTFRQCTDKLKEMEDTN
NKRLRALRSSGVEKIFEAYNWVQEHQHEFNKRVYGPVLLEVNVSNRIHADYLEGDVPGYI
WKAFITQDAADRDLLFRNMRSFDVPIINVTDRSQSRAPFQITEEMRMLGINSRLDQVFDA
PDAVNEALVDQFRLDHSYIGSRETDKRADEVLQLGIFDLWTPENHYRWTKSRYGGHVSGS
VESVDRSRFLLCNVDAGEVERLKSQKLQLDEAISTLEDNLRAVKSELRNIEDEGAKLEKQ
REEIINESLHEKKKRREMENRVKQRMINLKSLEREDDLDSVAAKLIDQIKAMKIQRFQLA
MEIKNLLIDAVAHRRSYAEHNMASLELALKVKEMEANVKHQEKFAVQASLHYEYCKKETE
EYRQQLEAAKRNAESVAIITPELEQAFCEMPSTIEELDAAIQDTISQANSILFLNHNVLE
EYEARQKKIESLSKSQEMEEEKLSNLTNEINALKERWLPTLRSLVSQINQTFSRNFQEMA
VAGEVSLDEHDMDFDKYGILIKVKFRETGLLQVLSSHHQSGGERSVSTILYLVSLQDLTN
CPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPNLEYSEACSILTVM
NGPWIEQPSKVWSGGECWRSIMGLTSVAAD
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacgtcgggcaaaacgccccaaaatcaccaggggcgaagatgattatatgcca
ggaaacataactgagattgagcttcataacttcatgacattcagcaagttgacatgcaaa
ccaggctcccgattaaatcttgtaattggaccaaatggctctggaaagagttctctagtt
tgtgcaatagcactcggccttggtggtgagcctcagcttttggggagggcttctagtatt
ggagcatttgtgaaacgcggggaagaatcaggttacatcaagatttccttgagaggggaa
accaaagaggaccagttaactattttgcgaaaaatagatacgcggaacaagtctgagtgg
atttttaatggaaaagctgtgccaaagaagaacgtaactgatatgattcaaaggttcaat
atccaagtcaacaatttgactcaatttctgcctcaagacagggtttgtgagtttgcaaag
ttaactcctgttcaattacttgaagagactgaaaaggctgtgggtgatcctcggctacca
gtccagcatgtcgatcttataagcaaaagtgaggagctgaagaagtccgaacgaactgtg
aagagcggcagagagacattggatcagctgaaggaagtcaattctcaacttgaacgagat
gtggaacgtcttcgtcagagggagcaactcctgggacaggctgaaacgatgaaaaagaaa
ttgccatggctgaagtacgatgctaagaaggctgagtttctggaagctaaaaggcaagag
caagatgccaaaaagaagctggatgaagctgctgagaatttgaatgaactcatggaacct
atagaggaaaaaaagcaagagaaagccgaacgagatgctaaatgcaaaaaagtaaacggc
ctgttgggtgataatgccaacaagcgtatgaaacttctggatcaggatagccgtttggat
gttcaagtgaatggaaaatataaagaaatggaagacttgaggaagcaagaagaatctcgt
caacgtcgaatttcaaaagctcaagaagatcttagtgctgccgaattggaacttgcaaat
cttccttcttatgaacctcccagaggcaaaattgatagtttgggttctaaaattttggag
ctgcaagatggtgcacgggagctaaggtctcagaaatcagaaatagaaagaacccttgat
cggaataggacaacattcagacagtgcactgataaattgaaggagatggaggacacaaac
aacaaaaggttacgtgctttacggagttctggtgttgaaaagatatttgaagcttacaat
tgggttcaggagcatcaacatgaatttaataagcgtgtctatggtccagttcttcttgag
gtcaatgtttccaatcggattcatgcagattacctagagggtgatgtaccaggatacata
tggaaggcctttataacacaagatgctgctgaccgtgacttgttattcagaaatatgcga
tcatttgatgttcctattataaatgttacagatagaagtcagagccgtgctccctttcaa
attactgaggagatgcgtatgctaggtatcaattcaaggcttgaccaagtttttgatgct
cccgatgccgtcaatgaagctctagtcgatcaatttcggttggaccattcttacataggc
tcacgtgaaactgacaagagagcagatgaggtgttgcaattgggtatctttgatttatgg
acccctgaaaatcattacagatggaccaaatccagatatggtggtcatgtttctggcagt
gttgaatcagtggaccgctctcgctttttgctatgcaatgtggatgctggggaagttgag
aggctcaagtcccagaaacttcagttggatgaagcaatctctacactagaagataatctc
agggcagttaagagtgagttgaggaacatagaagatgaaggtgccaaacttgaaaaacaa
cgtgaagagattataaatgagtcactacatgagaagaaaaaaaggcgtgagatggaaaac
cgtgtcaagcagcgcatgataaacttgaaatctttggaaagagaggatgatctggatagt
gtagctgcaaaacttattgaccagatcaaagctatgaagattcagcgattccaacttgca
atggaaattaagaatttacttattgatgctgtggctcacagaagaagttatgctgaacat
aacatggcatcccttgaacttgcgctgaaggttaaagagatggaagctaatgtgaagcac
caagaaaaatttgcagtacaagcatctctgcattatgagtactgtaaaaaggagacagag
gaatatcggcaacaattggaagctgccaagaggaatgcagaatcagtagctattataact
ccagaacttgagcaagctttttgtgagatgccatctacaattgaggagttggatgcggct
attcaagataccatttctcaagccaactccattctttttctgaaccataatgttctagaa
gagtatgaagcacgtcagaaaaaaattgaatctctttctaagagtcaagagatggaagaa
gagaaattaagcaacctcactaacgaaatcaatgctttaaaggaaaggtggctgccaaca
ttaagaagtcttgtttctcaaatcaaccagacttttagccgtaatttccaagaaatggct
gttgcaggagaagtttcattagatgagcatgacatggacttcgacaaatatgggatacta
attaaagtcaaattcagggagacgggactactccaagttctaagttcccaccaccaatct
ggaggagaacgatctgtttcaactattctttacctagtttctctccaagacctaacaaat
tgcccctttagagtggtggatgaaataaatcaaggaatggatcctatcaatgagaggaaa
atgtttcagcaactagtgagagctgcaagccaacccaatacaccgcagtgcttcttgctt
accccaaagttgctgccaaatcttgaatacagcgaagcatgcagcattctaacagtaatg
aatgggccctggattgagcagccatccaaagtttggagtggtggagaatgctggagatcc
attatgggtttaacctctgttgctgctgattag
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