Solanum lycopersicum (tomato): 101256036
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Entry
101256036 CDS
T02665
Name
(RefSeq) RAN GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101256036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101256036
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
101256036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_4
LRR_1
Motif
Other DBs
NCBI-GeneID:
101256036
NCBI-ProteinID:
XP_004247164
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Position
9:complement(59908009..59913845)
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AA seq
534 aa
AA seq
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MDSAGFSMKLWPPSSSTRLMLVERMTKNLITPSILSRKYGLLSKEEAEEDAKQIEALAFD
SANQHFDKEPDGDGSSAVQLYAKESSKLMLEVIKRGPQTKESAEGIVSEKVKASNETTIF
DISKGRRDFISAEEASELLKPLSEPGNNYKRICFSNRSFGGDAAKIAGPILSSLKDQLTE
VDLSDFVAGRPEEEALEVMEIFSSALDACDLRYLDLSNNALGEKGIRAFGALLKSQKNLE
ELYLMNDGISEEAAEAVCELIPSTDKLRILHFHNNMTGDEGALSISKLVKHSPALEDFRC
SSTRVGSEGGVALSQALGECRNLKKVDLRDNMFGVEAGIALSKVLSIFSGLTEIYLSYLN
LEDEGSIALANVLRESAPSLEVLEMDGNDITAKAAPALAACIAAKQFLTTLKLGENELKD
EGAILIAKALEDGHGQLTEVDMSTNAIRRAGARCLAQAVVNKPGFKVLNINGNFISDEGI
DEVKDIFKNSLHVLGPLDDNDPEGEDYDEEADEGGDNENDLETRLKDLDIKQEE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggattctgcaggattctctatgaagctgtggcccccaagttcgagtaccaggctaatg
ctcgtggagagaatgaccaagaatcttattactccatccatcctatccaggaaatatggt
cttttgagtaaagaagaagctgaagaggatgccaaacaaatagaagctctggcttttgat
tctgccaatcaacattttgacaaggagcctgatggcgatggaagttctgctgtgcaactt
tatgctaaggaatctagtaagctcatgttagaagttattaaaagaggccctcagacaaag
gaatctgcagaaggtattgtatctgagaaggttaaagcatctaatgaaactactattttt
gatatatccaaaggtagacgggatttcataagcgcagaagaggcgtctgagttgttgaaa
ccattaagtgaaccagggaataattataaaaggatatgtttcagcaatagaagctttggc
ggggatgctgctaaaattgcaggaccgattttgtcttctcttaaagatcaattgacagaa
gttgacctttcagactttgtagcaggtagaccagaggaagaagccctggaagtcatggaa
atcttttcttctgctttggacgcctgtgacctgaggtatctcgatctttctaacaatgct
ctaggtgaaaaaggaataagggcatttggggcacttttaaagtcacaaaagaacttggaa
gaactctatttaatgaatgacggcatttcagaggaagcagcagaggcagtttgcgagcta
atcccttcaactgataaacttcgtatccttcattttcacaataacatgacaggggatgag
ggtgcactttctatttctaaacttgtgaagcattctcctgcattggaggatttccggtgc
tcatctacaagggtaggatctgaaggtggggttgctctttcacaagcacttggagaatgt
aggaatttaaagaaggttgatttgcgtgacaacatgtttggtgtggaagctggaattgcc
ttgagcaaagtactatcaatcttttccggcttaactgaaatttacttaagttatctaaat
ttggaggatgaggggtccatagctcttgctaatgtcctcagggaatctgctccatccctt
gaggttttggagatggatggaaatgacatcacagctaaagctgctcccgctctggcagcc
tgtattgctgcaaaacaatttcttaccacgttgaagttgggagagaatgaattgaaagat
gagggtgctatattaattgcaaaggcattggaagatggtcacggtcaattaactgaagtg
gatatgagtaccaatgcaataagaagagctggtgccaggtgcttggcacaagctgtagtg
aacaaacctgggtttaaggtgctgaacatcaatggcaacttcatatctgatgaaggaatt
gatgaggttaaagatatttttaagaattcacttcatgtgcttggtcctttggatgacaat
gatcctgaaggagaagattatgacgaagaggctgatgaaggaggcgataatgagaatgat
ttggagaccagactcaaggatcttgatatcaagcaggaagaataa
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