KEGG   Solanum lycopersicum (tomato): 101256079
Entry
101256079         CDS       T02665                                 
Name
(RefSeq) histone deacetylase 5 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sly03036]
    101256079
Enzymes [BR:sly01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     101256079
Chromosome and associated proteins [BR:sly03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     101256079
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 101256079
NCBI-ProteinID: XP_010318852
UniProt: A0A3Q7GGL3
LinkDB
Position
3:complement(61789743..61804093)
AA seq 650 aa
MDSGERRRVGLIYDKRMKKHFDLEEVKHPESADRIQKIWNKLKDSGIAKRCTVMGGKEAK
DEHISLVHNRKHIDFIKSISSKEEMFWKEMAKKYNSVYFNQGSSEAAYISAGCVIEVAEK
VAEGELDSAFAIVRPPGHHAEPNQPMGFCLFNNVAIATKYLLDKRADLGIKKILIVDWDV
HHGNGTQKMFWKDPRVLFFSVHRHDFGTYYPCDEAGSHKMTGEGAGKGYNINVPWEHGGC
GDADYLAVWDHVLIPVAKEFGPDIILISAGFDAAIGDPLGGCCVSPHGYAVMLNKLLEFA
GGKIVMALEGGYDKVSIANSVQACMEVLLKQKPIIGSSEAYPFESSWRVIRAVRKTLSPF
WQSLSERLPVKITSMSSPYIQVVSSDSEDEYNTFSNRVSQHLEMDIENVIQPFSDLKVND
DTGITSQASNNSHTWREELSKIDIWYATFGSNMKLSRFLCYIEGGQVEGMRKPCIGSLDK
SKPKEIKWESFPHRLFFAREHTATWGPGGVAFLHPECNSDEKAYLCLYRITLEQFNDVLL
QENTSSFDMNYPLFDMTDLQSIEERKCVPVEAVKNGWYHNVLYLGKENGIPILTMTCQLS
DVDNFKSGKVGMCKPSKEYANTLIRGLVEGKQLSEEEATTYIQEAASRAL
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggattccggtgaacgacggcgcgttggactgatatacgataaaagaatgaaaaagcat
tttgatctagaagaagtgaaacatccggagagtgcagatcgtattcagaaaatctggaac
aagcttaaggattcaggaatcgctaagagatgtactgttatgggtggaaaggaagccaag
gatgaacatatatctttggttcataacagaaaacatatagatttcatcaaaagcattagc
tcaaaagaagagatgttctggaaagagatggctaagaagtacaattcggtatacttcaat
caaggctcttcagaagcagcttacatttctgcaggctgtgtgattgaggttgctgagaaa
gttgctgaaggagaactagactctgcctttgccattgtcaggcctcctggtcatcacgca
gaaccaaatcaaccaatgggattttgcttatttaacaatgttgctatagctacaaaatat
ctcttggataaaagagctgatttggggatcaagaagatcttaatagttgattgggatgtc
catcatggaaatggcacccaaaagatgttttggaaggaccctcgagttctcttcttttct
gtgcataggcacgattttggaacttattatccttgtgatgaagctgggtcgcacaaaatg
actggtgaaggagcgggaaaaggatacaatataaatgttccttgggagcatggcggttgt
ggtgatgcagactatcttgctgtgtgggatcatgtcttgattcctgttgccaaagaattt
ggtcctgacattatcctgatctcagcaggatttgatgcagctattggtgatcctcttggt
ggatgttgtgttagtccacacggatatgctgtaatgttgaacaagttgttggaatttgcc
ggaggcaagattgtaatggcacttgaaggtggatatgataaggtctctatagcaaattct
gtgcaagcttgtatggaagtgttattaaagcaaaaaccaattattggatcttctgaggct
tatccatttgaatcctcatggcgagtgatacgggctgtacgtaaaacgttgagtccattt
tggcaatcattatcggagagattaccagtgaagatcactagcatgagctctccttacatt
caggtcgttagctctgattctgaagatgagtacaacaccttttctaacagggtatcacaa
catttggagatggatattgagaatgtaattcaaccattttcagacctgaaagttaatgat
gacacaggcataacaagtcaagctagcaataattctcacacttggagggaagagctttca
aagattgatatatggtatgccacgtttggatcaaatatgaagttatcaaggttcctttgc
tatattgaaggaggacaggtggaaggcatgcgaaagccatgtattggttctttggataaa
agcaagccaaaggagatcaaatgggaatcttttccccatcgcctattctttgctcgtgag
catacagctacctggggtccgggtggggttgcttttcttcaccctgaatgcaacagtgat
gaaaaagcttacttgtgcctatataggataacgcttgagcaatttaatgatgttttactt
caagagaatacttcaagctttgacatgaattaccctttgtttgacatgactgacttacaa
tctattgaagaaagaaaatgtgttccagtggaggctgtcaagaatggctggtaccataat
gtgctttacctgggaaaggagaatggtattcctattttgacaatgacatgccaactgtca
gatgttgataacttcaaatcaggtaaagtaggtatgtgcaaaccatctaaagaatatgcc
aacactctgattagaggtttggtagaagggaagcagttatcagaagaggaagccaccact
tacatacaagaagcagctagcagagcattgtaa

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