Solanum lycopersicum (tomato): 101256260
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Entry
101256260 CDS
T02665
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101256260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101256260
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101256260
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
101256260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
101256260
NCBI-ProteinID:
XP_004234629
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All DBs
Position
3:7702900..7730052
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AA seq
360 aa
AA seq
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MARFSVGRDEHDNDEGGPCNSCTSVRKRRRTTAGTLSRGVVIRQQEEVEERERERVVREE
VEEEAEEEDWGSESEGNFRSSGDRRVPVCESEVLRENKPISGESMYQNFEGSIINRSISV
TLLDPDVLDCPICFEHLCVPVFQCGNGHIACAPCCIKIANKCPSCCLPIGYNRCRAMENV
LESLKVSCVNNRYGCKEILSYSKKTDHENACIYVPCFCPSHGCDFIGTAAKVYAHFSEKH
ASSADHISFNVVHPIYIEKDQRYIILQMRTEGILFIVNHASDRVGSAINIICVGQARQKR
RFSYKLVVTDGESSFKLESVAESVPNWTEDSPMKKFLVVPKDVVNSSARLKLDVLIEEKE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcgagattttcagttggaagagatgaacatgataatgatgaaggaggaccctgtaac
tcctgcacatccgtacgcaagagacggaggactaccgccggaactttatctcgcggcgtc
gtaatccgtcaacaagaagaagtggaagaaagagaaagggaaagggttgttagggaagaa
gtagaggaagaggcagaggaggaggattggggatcggaatctgagggaaatttccgatcg
agcggtgatcggagggtgccagtttgtgaatccgaggttttaagagagaacaagcctatt
tctggtgagagcatgtatcagaattttgagggttcaatcataaacaggtcaatttctgtg
acgttattggatccggatgtgttggattgcccgatctgctttgaacatctctgtgttcct
gtctttcagtgtgggaatgggcacatagcatgtgccccttgctgcatcaagattgctaat
aagtgtccatcatgctgtttgccaattggatataaccgttgtcgagctatggagaatgtt
ctagaatctctgaaagtgtcatgcgtgaacaataggtatggttgcaaggagatcctgagt
tatagtaagaaaactgaccatgaaaatgcatgcatctatgtgccttgtttttgtccttcc
catggctgtgactttataggtactgcagcaaaggtatatgcacattttagcgagaaacat
gcttcttcagcagatcacatttctttcaatgttgtccatccaatttatatagaaaaagac
caaaggtacataattcttcaaatgaggacagaaggtatactttttatcgtcaaccatgct
agtgaccgtgttgggagtgctatcaacatcatctgtgttggacaagctaggcagaagaga
aggttctcatacaagcttgtagtaacagatggggaaagttcttttaaactagaatccgtt
gcagagagtgtgccaaactggacagaagatagtcctatgaagaaattccttgtggtccca
aaagatgtcgttaattccagtgctcggctgaagttggatgttctcatagaagagaaggaa
tga
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