Solanum lycopersicum (tomato): 101256310
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Entry
101256310 CDS
T02665
Name
(RefSeq) RGG repeats nuclear RNA binding protein A
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101256310
Spliceosome [BR:
sly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101256310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
101256310
NCBI-ProteinID:
XP_069144059
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All DBs
Position
8:complement(2566253..2570596)
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AA seq
364 aa
AA seq
DB search
MATLNPFDLLDDDAEDPSLLVAAQQLKAPVASAPAKKGPVQPAKPAAKLPSKPVPPSQAV
REARSDGQRGGGRGGPRGGGRGRGRGRGFNQDFAADENAFGSNNGFSGRYSAPENGESGK
VSERRGGYGGSRGGFYGGRRGGFNNGDAADGEIERPRKVFDRRSGTGRGNEYIKREGSGR
GNWGTTADDIAPETEVPVVDGEKIVEAEKQTGQEDAGDNNKDSTAAEPEEKEPEEKEMTL
EEYEKVMEEKRKALVALKQEERKVNLDKELQSMQLLSNKKNDDEIFIKLGAEKDKKKEAV
EKAKKTQTINEFLKPAEGENYYRSGGRGRGRGRGRGYGGGYVGNNSVSAPSIEDVGQFPS
LAAK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggctactttgaacccattcgaccttttggatgatgatgctgaggacccaagtttgcta
gttgctgctcagcagctaaaggctcctgttgcatctgcaccagccaagaagggtccagtt
cagcctgctaagcctgctgctaagttgccctccaagccggttcctccttcacaggctgtg
agggaagccaggagtgatggccagagaggaggaggccgcgggggtccacgtggagggggc
cgtggtcgtggacgtggacgtgggtttaaccaagactttgctgctgatgagaatgctttt
ggcagcaataatggattctctgggaggtacagtgctccagaaaatggagaatcaggaaag
gtctctgaaaggagaggtggatacggtggatctcgtgggggcttttatggaggtcgtcgt
ggtggtttcaataatggggatgctgcagatggagaaattgaacgcccaaggaaagtgttc
gatcgacgaagtggcactggccgtgggaatgagtatattaaacgggagggctctggtcgt
gggaattggggaactactgcagatgatattgcaccggagactgaagtacctgttgttgat
ggtgagaagattgtcgaggctgagaaacaaactgggcaggaagatgctggagataacaac
aaggattctactgctgctgagccagaagagaaggaacctgaggagaaggagatgaccctc
gaggagtatgagaaggtaatggaggagaagaggaaggctttggtggctctaaagcaggag
gaaagaaaggttaatttggacaaagaacttcaatctatgcaacttctctcaaacaagaag
aatgatgatgagattttcatcaaattgggtgctgagaaagataagaaaaaggaggcagtg
gaaaaagccaaaaagactcaaaccataaacgagtttctgaagcctgctgagggagaaaat
tactaccgctctggtgggcgtggtaggggccgtggccgtggaagaggttatggcggtgga
tatgttggaaacaacagcgtttcagccccatccatcgaagatgttggccaattcccctcc
ttggctgccaagtaa
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