Solanum lycopersicum (tomato): 101256371
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Entry
101256371 CDS
T02665
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Module
sly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101256371
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101256371
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101256371
NCBI-ProteinID:
XP_010318778
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Position
3:complement(62806346..62809306)
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AA seq
407 aa
AA seq
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MMISNSQFYLVTFLVLLCIVSSVRSADIKTFNVIDFGAVGDGRTDDLPAFLKAWEAVCQS
ESSRVILVIPKRKKFLLKPSEFDGPCKPSSIHIQVSGNIIAPNSKSAWDGAATNAWLTFA
NIDHLTVNGNGVFDGLGHIWWSNACTNDNTSPETQCKGPTALIFRRCDQLRVRGVTMIRS
PRSHIILTACNEVSIANIRIMSPGDSLNTDGIGVSGSTHVQIQNSLIATGDDCIAIGGGS
SNISISGITCGPGHGISIGSLGEGGFEVVEDVNVRNCTMKDTLAGVRIKTWQGGEGYARR
IAFEGIVFVAVNNPIIIDQFYCPSRVNCKKDTAAVALSDITFRGILGTSLMDEVINLSCS
ETVGCKNILVDRVYISSVNGNPVHAKCINAHGRYTHTSPAVKCLLPP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatgattagtaattcgcagttttacttggtaactttcttggttttgttgtgcatagtt
tcttctgtacggagtgctgatattaaaactttcaatgtcatcgattttggggctgtcgga
gatggaagaactgatgatctcccggctttcctcaaggcatgggaagctgtatgtcaatcg
gaatccagtcgtgtaattcttgttataccaaaaagaaagaaattcttacttaagccttca
gaatttgatggtccttgcaagccctccagtatacatattcaggtatctggaaatataatt
gcacctaactcaaaatcagcatgggatggagctgcaaccaatgcatggctcacttttgcg
aatattgaccatcttactgtaaatggcaatggagtttttgatggcctaggccatatatgg
tggtcaaatgcttgcaccaatgataacacatccccagaaacacaatgcaaaggacccact
gcattgattttcagaagatgtgatcagcttcgagttaggggagtaacgatgattagaagt
cctagaagtcatatcatattgactgcttgcaatgaagttagcattgctaatattcgtatt
atgtcccctggtgatagtctcaacaccgatgggattggcgtttccggtagcacacacgta
caaatacaaaactctctcatcgcaacaggtgacgactgtattgcaataggaggaggatcg
tccaacataagtattagcggcataacatgcggacctggccatggtattagtattggatcc
ttgggagaaggaggatttgaagtcgtggaagatgtgaacgtacgaaattgcacgatgaaa
gacaccttagcaggagtaaggattaagacctggcagggaggcgaagggtatgcaaggagg
attgcttttgaaggaattgtatttgttgcagtcaacaatcccatcatcatagaccagttt
tactgtcccagtcgagtcaattgcaaaaaagatacagctgcagtagcattgagtgacata
acattcagaggaatactagggacttccctgatggacgaggtgataaatctgagctgcagc
gagactgttggctgcaaaaacatacttgttgatcgagtatatatatcatctgttaatggt
aaccctgttcatgccaagtgcatcaatgctcatggaagatacactcatactagccctgct
gtgaaatgtctgctgccgccatag
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