Solanum lycopersicum (tomato): 101256404
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Entry
101256404 CDS
T02665
Name
(RefSeq) COP1-interactive protein 1-like
Organism
sly
Solanum lycopersicum (tomato)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KIP1
DUF3618
Pox_polyA_pol_N
UPF0242
Crescentin
ATG16
Motif
Other DBs
NCBI-GeneID:
101256404
NCBI-ProteinID:
XP_004246103
UniProt:
A0A3Q7HUQ1
LinkDB
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Position
8:67113581..67121372
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AA seq
1341 aa
AA seq
DB search
MTKHRFRERVKSFFGSHVDPEKDEELKGTKAEIEDKIQKILAYLKGEDAGDEKEPLVEAV
EDFHNHYQSLYARYDHLTGKLRDNVHGKHEKDSSSSSSDSDSDSDGSTRKKGKKNGKLKF
TEVTDGIKEELASANLEIIELKAQLMAAKEEKDALQSEHQSTLSKLQEAETTICSLTSEA
ERLEVENSKHLGETVDLKENLEKSAKLESELMQKLDEMTKERESLLLEKEAMGNSILEGN
NTIEELRTTMGQLKEEKETLHIELEALKSELPSVKEQLDSAEKEIAQLSQTQKVTEEDNS
SLSSKVLQLSEEIEQAQQKIQDLVTEADQLKGMLDEKEKEFASHKEIHDAHKTEASTRLR
GMELEIGSLQSQRSEIEKQKEDELSALLNKLEEKEGEFSSQMEALTTKISNMQLEIESLS
ELKGKLEEEMEQQRNKMSAEVEDLTNKVNKKDLELESLCSQKLELEAELEKKTQEISGFS
SEIESLKEDIANKSAESLKILEEKESSLSKVKDLEVELKSLQNLKHELEEQLTSKDETIV
QMKNDKEMMHDKISEIERALTERESELAILRKNSEDGEIESSAQIAALTLQLSNLKEHSE
NLQVEKSQIESQLEAKAGEASEYLTQLEKLKGELARNTSEGQRMLEEKEGLVVQVREEKG
SLLRKISELESALAEKVEEHETLQKKLEEVQNEASTQIAALTEEVDKLRQQTELLQTEKS
QMELVIETGKQEFTESLAQAENQNTELSQKLVDQEIRLKEREEAFGKLVEEKDSLVIQVN
DLQAEVKSLCEKISTLEENTSNTNNEISLLKDEKESFLLKISELENSLVKKVEEYQALQK
RLEDVQNDTSAQIVALTEEANKSQQQIELLQTEKDQLTLVIEGGKQESTESLAQAESQNT
ELSQKIVDQELKLKEQEEALGKLVEEKEGLVVQVNDLQAEAKSLCEQMSTLEENISSANN
ESNLLKEEKVSLLSKLSDLENALTEKVDEHGQTLAHAENQHTELSQKIVDREMKIKEHEE
AFGKLGEEHKQLDGMLQEYKEKIKLAEMKIEEMTEEYQKNLESKDHKIHELDNKIEDLKR
DLEMKGDEISTLVENVRNTEVKLRLTIQKLRVTEQLLTEKEVDHQKKEEKLLQHQKLLEE
RIATLSGVITEYKETQAKIKADLSNKVNDTLTQMDTFNMKFEEDTGHLESRIYEILNELK
VALNLIKVTSEEKKQLKKEVNTLVQQLNDEKECALVLKEKVEKLEFAGKNEVSQRGSLTE
TVHQLEVKIATLHKMLVEKDEKMGEYERKMNDKDKGMLDLSEEKREAIRQLCIWIDYHQS
RYDDLIERISTKTKGKRQVTA
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagcatcggttcagggaaagagttaaatccttttttggaagtcatgttgatcct
gagaaagatgaagagctgaaaggaaccaaagcagaaattgaagacaaaattcagaagatc
ttagcctatcttaaaggagaagatgctggagatgaaaaagaaccacttgttgaggcagtt
gaagattttcacaatcattaccaatcactgtatgctcgttatgatcatctcactggaaaa
ctgagggataatgtacatggaaaacacgagaaagatagttcttcctccagctcagactca
gactcagattcagatggcagtacgagaaaaaaggggaagaaaaatggtaaactgaaattc
acagaagtaacagatggcatcaaggaagaattggcaagcgcaaatctggaaataattgag
ttgaaggctcagctgatggctgcgaaagaagaaaaggacgccttgcaatccgagcaccag
agcactctgagtaaattgcaagaagcagaaacaacaatctgcagtttgacgagtgaagct
gaaaggttggaggtggaaaattcaaagcatctaggtgagacagtggacctcaaagagaat
ttggagaaatctgcaaaattagaatctgaattaatgcagaagctggacgaaatgactaaa
gaaagagaaagcttactcttggagaaagaagccatgggaaacagcattttagaaggcaat
aatactattgaggaattaagaaccactatggggcagttgaaggaagagaaagaaacccta
cacatagaactggaagccctaaaaagtgaacttccctcagtgaaggagcaactagattct
gctgaaaaagaaatagctcagctaagtcaaacgcaaaaggtcacagaggaagacaattct
tcactatcatcgaaagttttacagctttcagaggagatagagcaagctcaacaaaagatc
caagaccttgtgactgaagctgaccagctaaaggggatgctagatgagaaagaaaaggag
ttcgcttctcacaaggagatacatgatgctcataaaactgaagcatcgactcgtttaaga
ggtatggaactggaaattggttcactgcagtctcagagatcagaaatagagaaacagaag
gaagatgagctctctgcattgctgaataaacttgaggaaaaggagggggaattctcatcc
cagatggaagctctgaccacaaagataagcaatatgcagcttgaaattgaatccttaagt
gaactgaaaggcaaattggaggaggaaatggaacaacaaagaaacaagatgtcagctgag
gttgaggacttaacaaacaaggtgaataagaaggacctagaattggagtctctttgcagc
cagaaacttgaattggaagcagaattggagaagaaaacacaagaaatttcaggattctca
agtgagatagagagtctcaaggaggatatagcaaacaaatctgcagagtcactgaaaatt
ctggaagagaaagaaagttctctttcaaaagtgaaggatctagaagtggagctaaaatca
cttcagaatctgaaacatgaattggaagagcagctgacaagcaaggatgagacaattgtt
cagatgaaaaatgacaaggagatgatgcacgataaaatttctgaaattgagagggcatta
actgagagagaaagtgaactagccattttaaggaagaactctgaagatggggaaattgaa
tcatctgctcagattgctgccttaactttgcagctgagcaatctgaaagagcactcggag
aatctgcaagttgagaagtctcaaatagagtctcaacttgaggcaaaagctggagaagca
tcagaatacctcacccagttggaaaagttgaagggggaattagcaaggaatacatcagaa
ggccagagaatgctggaagagaaggaaggtctagtggtacaggtcagggaagaaaaggga
agtctcctaagaaaaatatctgaactggagagtgcattagcggagaaagtggaagagcat
gaaaccttgcaaaagaagctagaggaagtgcaaaatgaagcttctactcagattgctgcc
ttgactgaagaagttgataagttaaggcagcaaacagaattgctgcaaactgagaaaagc
cagatggagttggtaattgagacaggaaaacaagaattcacagaaagtttggcacaagca
gaaaatcagaacaccgaattatcacaaaagcttgtggatcaggaaataaggctgaaagag
agggaggaagcattcgggaagttggtggaagagaaggacagtttagtgatacaggtcaat
gatctccaggctgaagtgaagtcactttgtgaaaagattagcacattggaagaaaacaca
agcaatacaaacaatgagatcagtctgttgaaggacgaaaaggaaagtttcctcctgaaa
atatctgaactggagaactcattagtcaagaaagttgaggagtatcaagccttgcaaaag
agactagaagatgtgcaaaatgatacttctgctcaaattgttgccttgacagaagaagct
aataaatcccagcagcagatagagttactgcagactgagaaagaccagctgacattggta
attgaaggaggtaaacaagagtccactgaaagtttggcacaagcagagagtcagaacact
gaattatcacaaaagattgtggatcaggaattaaagctgaaagaacaggaggaagcgctc
gggaagttagtggaagagaaggaaggtctagtggtacaggtcaatgatctccaggctgaa
gcgaaatccctttgtgaacagatgagtaccttggaagaaaacataagcagtgcaaacaat
gagagcaatctgctgaaggaggaaaaggtaagtctcctaagtaaactatctgatctggag
aatgcattaaccgagaaagttgatgagcatggtcagactttggcacacgcagagaatcag
cacactgaattatcacaaaagattgtggatcgggaaatgaagattaaagaacatgaggaa
gcatttggaaagttgggcgaggagcacaaacaacttgatggtatgctgcaggagtacaag
gaaaaaatcaaacttgcagaaatgaagattgaagagatgacagaagaataccagaagaat
cttgaaagtaaagatcataaaatacatgaactggataacaagattgaagatctaaagagg
gatctagaaatgaaaggagatgaaatcagcacactggtggagaatgttcggaacactgag
gttaagcttcgattaaccattcagaagcttcgggtgactgaacagttgctcacagagaaa
gaagtggaccaccagaagaaagaagagaagttactgcaacatcaaaagttactggaagag
aggattgcaacattgtcaggagttatcactgaatacaaggaaactcaagcaaaaataaaa
gcagacctttcaaataaagtaaatgacactttgactcaaatggatacattcaatatgaag
ttcgaggaagacactggtcacctggagtcccgcatttacgaaatattgaatgagcttaag
gttgctttgaacttgatcaaagtaacaagtgaagaaaagaagcagctgaagaaggaagtc
aacactctagtgcaacaactgaatgatgagaaagaatgtgcattggtgctaaaagagaag
gttgagaaattagaattcgcagggaaaaacgaggtgagtcagaggggtagtttgacagaa
accgttcaccaacttgaagtgaagatagctacattgcataaaatgttggtggagaaggat
gaaaagatgggagagtatgaaaggaagatgaatgacaaagataagggaatgttagacttg
agtgaggaaaaacgagaggcgataaggcagttgtgtatctggatcgattaccaccagagt
cgctatgatgatcttatagaaaggatctcaacaaagactaagggaaaaaggcaagtaaca
gcttga
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