Solanum lycopersicum (tomato): 101256537
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Entry
101256537 CDS
T02665
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00531
Glycosaminoglycan degradation
sly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
101256537
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sly00536
]
101256537
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
101256537
Glycosaminoglycan binding proteins [BR:
sly00536
]
Heparan sulfate / Heparin
Enzymes
101256537
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
101256537
NCBI-ProteinID:
XP_004249602
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All DBs
Position
10:63688827..63692005
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AA seq
542 aa
AA seq
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MQMASSFKCLLVLYFLLLSLYFTQISRAGDIVEEGILYIDGVSSIAKIDKDFICATLDWW
PPTKCDYGTCSWGNASLLNLDLSNKVLVNAIRAFSPLTIRLGGTLQDKLIYQTMHDKQPC
LPFFHDDTELFKFTQGCLPLSRWDELNEFFKKTGAKVTFGLNTLNGKKIASDGRTALGDW
DSSNAESLIRYTVSRGYNIHGWELGNELNGNGIGPAISADQYACDIIALQKLVQDIYKGK
DVMPLILAPGGIFDAIWFPKFINKASNSLQVVTHHIYSVGGGDDTNLVQKILEPSHLDEE
SKYLQNLQGVLRNSGTSAVAWVGESGGVYNSGRNLVSNSFVSGFWYLDQMGMSATFDTKT
YCRQTLVGGNYGLLNTTTFHPNPDYYGALLWHRLMGRNVLSTQFQGMKKLRSYAHCSKSS
EGIALMLINMHSSITVNISLSVTVANTNESPMLLQVTNDQNARHEIEREEYHLTAKDGDL
HSQTVLLNGNELNVDHFGRIPLLEPVRVNPSHPISIAPLSIVFVHIPSIQVPACSMYTRE
YM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatggcttcttccttcaaatgcttgttggtgttgtactttttgttattgtccttg
tacttcacccaaatttcaagagcaggagatattgttgaagaagggattctttacattgat
ggggtttcttcaatagcaaaaattgataaagattttatttgtgcaactttagattggtgg
cctcctactaaatgtgactatggaacttgtagctggggaaatgcttctcttcttaatctt
gatctaagcaacaaggtattagttaatgcaattagagcgttttctccattaacaattaga
cttggaggtacattgcaagataaactaatataccaaacgatgcatgataaacaaccatgt
cttccatttttccatgatgatacagagctgtttaaattcacccaaggttgcttgcctttg
tctcgttgggatgaactcaacgaattcttcaagaaaacgggggcaaaagtaacttttggg
ttgaatactttaaatggaaagaaaatagcttctgacggccgcactgctttgggagattgg
gattctagcaatgcagagtctttaatcagatatacggttagcagaggttataatatccac
ggctgggagcttggaaatgaattgaatggaaacggaataggtccagctatttcagccgat
cagtacgcttgtgatattatagctcttcaaaaattagtgcaagatatatataaagggaag
gatgttatgccattaatccttgcaccaggaggaatatttgatgctatttggtttccgaaa
tttataaataaagcatctaattctcttcaagtagttacacatcacatttacagtgttggt
ggaggcgacgacaccaacctagttcagaaaatacttgaaccttctcatctggatgaagaa
tccaaatacttgcaaaatcttcaaggcgttctccgaaactctggaacttcagctgtagca
tgggttggtgaaagtggaggagtttataacagtggtcgcaatcttgtttcgaatagcttt
gtgtccggcttttggtacttggatcagatggggatgtcagccacgttcgatactaagaca
tattgtcgacaaacattggttggtggcaactacggtctcctcaataccacaacctttcat
ccaaatcctgattattacggtgctcttttatggcaccgtttgatgggaaggaatgttcta
tcgacacagttccaaggaatgaaaaaactacgctcatacgctcactgttcaaaatcttct
gaaggaatcgcactgatgttgatcaacatgcatagtagtataacagttaatattagtctt
tcagtcacagttgctaacacaaacgagtcgccaatgctgctacaagtcacgaatgatcag
aacgcgagacacgaaattgagagggaagaatatcacctcacagccaaagatggtgattta
catagccaaacagtgcttttgaatggaaatgaacttaatgtggatcattttggaagaatc
cctctgttagaacctgtaagagtaaacccctctcatccaatttctattgctcctctttca
attgtatttgtccacattccctctattcaagtgcctgcttgtagtatgtatacaagagag
tacatgtaa
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