Solanum lycopersicum (tomato): 101256564
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Entry
101256564 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101256564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101256564
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101256564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
Zn_ribbon_RanBP
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Vps36-NZF-N
DZR
Motif
Other DBs
NCBI-GeneID:
101256564
NCBI-ProteinID:
XP_004252231
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Position
12:47527261..47541048
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AA seq
653 aa
AA seq
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MPRKVNYGVDYEEDFYDYEDYNYDYDDGHEYAETNGRVLETNTKQELVKVDIWRCSICTF
DNRASMNVCDVCGNPKQELVKAGVWCCPICTFDNEDTTNLCDMCGVLRNPLIKGGGGKAS
AATSDKVEQSNVSKKEIAGEVKKELVSEEPTSSSASTAKVRRDNMKDRGSSIKSRGYHGV
MSNVGNMSVSSNPRNAESRIAPSRSQTKPQKIVCTDQLEDKLNQLNLAIVGHVDSGKSTL
SGRLLHLLGQISQKEMHKYEKEAKQQGKGSFAYAWALDESAEERERGITMTVAVAYFNTK
SYRVVLLDSPGHRDFVPNMISGATQADAAILVVDASIGAFEAGIDVSGGQTREHAQLIKS
FGVDQIIIAINKMDVVGYSKERFDTIKNQLGTFLRACKFKDSLVLWIPLSAMENQNLVTS
PSDARLLSWFQGPCLLDAIDSLQPPQRDYSKPILMPICDLVKLPSQGQVSVCGKLETGAL
QTGDKVLVIPSREMATVRSLEHNSQVCNSAKAGDNVTVNLQGIDVNRVMAGDVLCHPEYP
IAVTNHLELKILLLDIAVPILIGSQLEFHVHHVKEAARVVRILSLLDPKTGKETKKSPRC
LLAKQNAIIEVVLQGIICVEEHSKCKGLGRVSLRASGRTIALGLVTRVLEKKE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaggtaaattatggggttgattatgaggaagacttttatgactatgaagat
tacaattatgactatgacgatggacatgaatatgcagagacaaatggaagggtcctagaa
acaaatacaaagcaggaattggtcaaggttgacatctggcgttgttccatttgcacattt
gataacagagctagtatgaatgtatgtgatgtatgtggaaatccgaaacaagaactagtt
aaggctggggtgtggtgttgtcctatttgcacatttgataatgaagataccacaaattta
tgtgatatgtgtggcgtcctgcgtaatccattgatcaaaggcggcggtggcaaagctagc
gcagcaactagcgacaaagtcgaacagtcaaatgttagtaaaaaggaaatagctggcgaa
gttaaaaaagaattggtttctgaagagcctactagctcttctgcatcaacagcgaaggtt
agacgtgataatatgaaggatagaggttcttctataaaatctagaggatatcatggcgtc
atgagcaatgtgggcaatatgtctgtatcatcaaatcctcgcaatgcggagagtagaatt
gcaccttcaagatcacagactaaacctcagaaaattgtatgcactgatcaattagaagac
aaactgaaccagctaaatcttgcaatcgttggccatgttgattctgggaagtcaacactg
tcaggaagactactacaccttttggggcagatatctcagaaggaaatgcacaaatatgaa
aaagaggccaagcagcaaggaaaagggtcctttgcttatgcttgggctttggatgagagt
gctgaggaaagagagagaggaataactatgacagtggctgttgcctactttaacacaaaa
agttaccgcgttgtactgcttgattccccaggccatagagactttgtcccaaatatgata
tcaggtgcaacacaagcggatgctgccattcttgtagttgatgcttcaataggtgcattt
gaagctggcattgatgttagtggaggtcagacaagggagcatgcacaacttatcaaaagc
tttggggtggatcagataataattgctattaacaaaatggatgtagtgggatactccaaa
gaacggtttgatacaattaagaatcaactaggaacatttctccgggcttgtaagtttaaa
gattcattagtattgtggattcccctgagcgccatggaaaaccaaaatttggtgacaagt
ccttctgatgcaagattgttgtcctggtttcaaggtccatgccttttagacgccatagac
tctctccaacctccccagagagattactcgaagcctatattaatgccgatatgtgatctc
gttaaattaccctcacaaggacaggtgtcagtatgtgggaagttggagacaggagctctt
caaactggagataaggttctagttattccatcaagagaaatggcaactgtgcgttctttg
gaacataattctcaggtttgtaacagtgcaaaagctggagataatgtcactgttaatcta
caaggtatagatgtgaatcgtgtaatggcaggggatgtgctgtgccaccctgaatatcct
attgctgttacaaatcatttggaactgaagattcttctcctggatattgctgttccaatt
ttaattgggtctcagttggaatttcatgtacaccatgttaaggaggctgcaagagttgtg
aggattttgtccttgcttgatccaaagactggaaaggagaccaagaaatcacctagatgt
cttctagcaaagcagaatgctataattgaggtagttttgcaagggataatttgtgttgaa
gagcattctaaatgtaagggtcttggaagggtgtccctcagagcatcaggaagaaccatc
gctcttggtcttgtgactagagttctagagaagaaggaatag
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