Solanum lycopersicum (tomato): 101256604
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Entry
101256604 CDS
T02665
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sly03009
]
101256604
Enzymes [BR:
sly01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
101256604
Ribosome biogenesis [BR:
sly03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
101256604
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
101256604
NCBI-ProteinID:
XP_004243478
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All DBs
Position
7:63164625..63173865
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AA seq
646 aa
AA seq
DB search
MAGKLGKKVGSKLGKPPTKKKQKKEPLPPKPLEKEDLFSDSEGTDGDFEEDGGSGDEEQQ
EMNSDSDMSSDLDDPFAADILASGDADDCSDVHSDSDVDSDSDADDTDLVRKSKAIDDER
KREEEEGDLELQLNIKEEADEFRLPTTEELEEETNRPPDLSNLQRRIKEIVRVLSNFKSL
RQENVTRKDYVDQLKRDLGSYYGYNDFLIESLVELFPPVELIELIEAFEKPRPISLRTNT
LKTRRRDLAGVLLNRGVNLDPLSKWSKVGLVVYDSQVPVGATPEYMAGHYMLQSASSFLP
VMALAPQENERIVDMAAAPGGKTTYVAALMKNSGIIYANEMKESRLKSLTANLHRMGVTN
TIVCNYDGRELPKVLGQNTADRILLDAPCSGTGVISKDESVKTSKTAADIQNCSHLQKEL
ILAAIDMVDANSKSGGYIVYSTCSIMVDENEAVIDYALKKRDVKLVPCGLDFGRPGFVRF
RQHRFHTSLDKTRRFYPHVHNMDGFFVAKLKKMSNSKSAAKASAQSEEIEDADTIESSDQ
QNAEEDDDKHSEQEGIAKESGKLNEKAVADKKRKRDFQKHSDKKGVGQNGGGTKNGRAEN
KPVAPKRREKKKPPPIEEIAKAREEKRNALREEKRKATLKKKSGNK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaaactcggtaagaaagtgggttctaaattagggaaaccaccaaccaagaag
aagcagaagaaggaacctttgccacctaagccactggaaaaggaggatctttttagtgac
agtgaaggaactgatggagattttgaagaagatggaggttctggtgatgaagaacaacag
gaaatgaactcggattctgacatgtcttctgacttggatgacccctttgctgctgatata
ttagcaagcggtgatgctgacgattgttccgatgttcattccgattcggatgtagattct
gattcagatgcagatgatactgatcttgtaaggaagtcaaaagctattgatgatgaaagg
aaaagagaggaggaggagggtgatttagaattgcagctcaatattaaagaagaagctgat
gagttcagattgccaacaacggaggagctcgaagaagaaacaaatagacccccggatctc
tctaatctccaaaggaggataaaagaaattgttcgggtgctctcaaatttcaagtcattg
aggcaagaaaatgtgacacgtaaggattacgttgatcaacttaaaagggacttgggttca
tattatggatacaatgattttctcattgaatcgttagtggagctgtttccccctgttgag
ttgattgaacttattgaagcatttgaaaagccccggccaatttctctgcggacaaacact
ttaaagactcgcagacgggatttagcaggtgttcttcttaacagaggtgtcaatttggat
ccactaagcaaatggtcaaaggttgggctagttgtatatgattctcaagttccagttggt
gccactcctgagtatatggctggtcactacatgctccaaagtgcgagttcgtttctgcct
gtaatggcccttgcccctcaagagaatgaacgtattgttgatatggctgctgctcctgga
ggcaaaacaacttatgttgctgcactgatgaaaaatagtggtattatttatgcaaatgag
atgaaggagtcgagacttaaatcactcactgctaacttacatcgcatgggggtaacaaac
accattgtctgtaactatgatggaagagagctacctaaagtcttgggtcagaacactgcc
gatagaattttgctggatgctccctgcagtggcactggggtgatttccaaggatgagtct
gttaaaacttccaaaactgctgcagatatacaaaattgctcacacctgcagaaggaactg
atacttgcagcaattgacatggtcgatgccaactcaaaatcgggtggatacatagtgtat
tctacctgctccatcatggttgatgagaatgaagcagttatagattatgcactcaagaag
agagatgttaaactcgtgccttgtggacttgattttggcaggcccggatttgttcgcttt
aggcagcaccgtttccacacatcgttggacaagacacggcgattctatcctcatgtgcac
aacatggatggattctttgtggcaaagttgaaaaagatgagcaattccaagtctgctgca
aaagcgtcagctcagtccgaagaaatagaagatgctgataccattgagagcagtgaccag
cagaatgctgaagaggatgatgacaagcattcagagcaagaaggcattgctaaagagagc
ggaaaattgaatgaaaaagcagtagctgataaaaaaaggaagagagatttccaaaagcat
tcagataaaaaaggtgttggacaaaatggtggtggaactaaaaatgggagggcagaaaac
aaaccggtggcaccaaaaaggagggaaaagaagaaaccccctcctatagaagaaatcgca
aaagccagggaagagaagaggaatgctcttagggaagaaaaacgaaaagccacattgaag
aaaaaatctggaaacaagtga
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