Solanum lycopersicum (tomato): 101256656
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Entry
101256656 CDS
T02665
Name
(RefSeq) recQ-mediated genome instability protein 1-like isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
101256656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sly03400
]
101256656
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
101256656
FA (Fanconi anemia) pathway
101256656
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Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Hanta_Gc_C
Motif
Other DBs
NCBI-GeneID:
101256656
NCBI-ProteinID:
XP_004252036
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Position
12:complement(919291..925161)
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AA seq
641 aa
AA seq
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MGRRRHQIICSSDEEDDGDDEPQQFAGGNEENENPNNIEMEILESSTNFQSVTLNSPIQN
PTPDHEPNVDIYEVIRASDCGIGRVLENLGLRLRREWLESCVGGLEGSVVGEFSGLDDTT
KAKLCFEQFLYSDMIFCGAGMLPRDVHKLHLVDLKGPFVLQVDEIVNISCPLRDRYQKVA
AGIKRCLKLSMTDGIQRVFGMEYRPIKDLDVLAPSGLKVAICNVHVRHGILMLVPEVIEV
LGGMVEDLEEARKRLVNEINKPPRGKRTRSGVVPPLATRAIAAAWPREGVTVPEHSDTSS
RQNMQFQVHERGTSGIATTASEEIHPVRSGLPSSTTFITPVYRREAQSNIPSTPAVSVPF
NRNAEPTFSSDAASHAEDIHMADMTTEDIDVAIRREHNDTVLSSLSSMDVEELLSDVRSD
PTTPASSRTRGSVCVSSGSFHNEDVTPDTLSTAAIDVDQIDLVDELDHPYILSGAKENPF
TYLASLSAKQAGVNGSASTVTGKIKCFLTGVKGFQYKQSSKYELRVYVDDGSLISEILID
HALVQEKIGFSPAEVNAALSSSDGKRVSDTKETLKCFQKFLINFEGTMLVHLNEESPIPV
ATEMNQGCSASDAWLLLKRLKPSTSPRQHHLHHSETINLSP
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaagacgccaccaaatcatctgttcctccgacgaagaagacgacggcgacgac
gaacctcagcaattcgccggcggcaatgaagaaaatgaaaatcctaataacatagaaatg
gaaattctagaatcatctactaacttccaatcagttaccctaaattctcccatccagaac
cctacacctgatcatgagccaaacgtcgacatttatgaagttatacgagcttcggattgt
ggtattggtcgggtattggaaaatttagggctaagattgcggagggaatggttagaatca
tgtgttggaggacttgaaggatcagtagtaggagagttttctggattggatgatacgacc
aaggcgaaactttgtttcgagcagtttttgtactcggatatgattttttgtggtgcagga
atgcttccaagggacgttcacaagctgcatttggttgatcttaaagggccctttgttctt
caggtagatgagattgtgaatatcagttgtcctcttcgagataggtatcagaaagtagct
gctggaataaagaggtgtctgaaattgtccatgactgatggcattcagcgagtgtttggg
atggagtacaggcctataaaagatctcgatgttctagctccttctggactgaaggttgct
atctgtaatgttcatgttaggcatggaattctgatgttggtccctgaagttattgaagtt
ctgggtgggatggtggaagacttagaagaagcaaggaagcggctagttaatgaaataaat
aagccaccaagggggaaaagaacaaggtctggtgtggttcctcctttggcaactagagct
attgctgctgcatggccacgagaaggtgttactgttccagagcactctgatacttcctca
agacaaaatatgcaatttcaggttcatgaacgaggaacatctggcattgctactactgca
agtgaagaaattcatcccgttagatctgggctaccatcttctacgacattcatcactcct
gtttatagaagagaggctcaatctaatatcccatctactccagctgtttctgtcccattc
aataggaacgctgaacctaccttttcatctgatgcagctagtcatgcagaggatatccat
atggctgacatgaccactgaagacattgatgttgcaattagaagggaacataatgacact
gtcctttcatctttgtcttccatggatgtggaggaacttttgtcagatgttagaagtgac
cctaccacacctgccagtagcaggaccagaggaagcgtttgtgtgtctagcggtagtttc
cataatgaagatgtaacaccagatacattgtctactgcagcaattgacgttgatcaaatt
gatttggttgatgaattggaccatccatatatactttctggagcgaaggaaaaccctttc
acttacttagctagtctgtcagctaagcaggctggtgtgaatggcagtgcttccactgtt
acaggaaaaattaagtgctttcttactggtgtgaagggctttcagtataaacagagtagt
aaatacgagcttcgggtttatgttgatgatggcagcctaatctctgagatccttatagat
catgctcttgtgcaggaaaaaataggcttttctcctgcagaggtaaatgctgctcttagt
tcttcagatggcaaacgagtcagtgacacgaaggagactctgaaatgtttccagaaattc
ttgattaattttgagggaacaatgcttgttcatttgaatgaagaatctccaattccagtt
gctactgaaatgaaccaggggtgctctgcctctgatgcatggttgcttctcaaaagacta
aagccttctacttctccgcgacaacatcatcttcatcactcagaaaccatcaatttatcc
ccttga
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