Solanum lycopersicum (tomato): 101256865
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Entry
101256865 CDS
T02665
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101256865
04121 Ubiquitin system [BR:
sly04121
]
101256865
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101256865
Membrane trafficking [BR:
sly04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
101256865
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101256865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
Rad50_zn_hook
zf-RING-like
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
101256865
NCBI-ProteinID:
XP_004236734
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All DBs
Position
4:4643827..4648705
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AA seq
395 aa
AA seq
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MSSTYWCYRCNRFYRVWSEESITCPDCNTGFVEEIEAPTRSTLSGSRRRRFPPAVMQTAA
RSTDQSPASGYGSGSSPGVRRNRRNTGDRSPFNPVIVLRGSTNGGGAGGEGGGGGGGGGF
ELYYDDGTGSGLRPLPTSMSEFLLGSGFDRLLDQLAQIEANGIGRMENPPASKAAIESLP
TIEIIHSHIVAESCCAVCKEAFELGTEAREMPCKHLYHSDCILPWLSLRNSCPVCRHELP
SESRDVVDPNRAPSEQSEQSVATNNEVEEAVGLTIWRLPGGGFAVGRLGRRGGERALPVV
FTEMDGGFNNNNNNGVPRRISWGSRGSESRQSGGFRRFFGNLFSCFGGIGSSGSSSSSDS
RINQSRSSSMSSVFLATARRRRGWGFEANNGVRRW
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaacgtattggtgttatagatgcaataggttttacagagtatggagcgaggaa
tcgattacttgtcctgattgtaacacgggatttgttgaagaaattgaggctccgacccga
tccacgttgtccgggtcacggcgtcggcgtttccctccggcggtgatgcagacggcagcg
cggagtacggatcagtctccagcttcgggttatggttctgggtcaagtccgggtgttcgt
aggaacaggaggaatactggtgaccggtcgccgtttaatcctgtgatagtccttcgtggt
tctaccaatggaggtggtgcgggaggggaaggtggaggaggcggtggaggaggggggttt
gaactgtattatgatgatggaaccgggtcgggtttgagacctttacctacgagtatgtct
gagtttttactcgggtcgggtttcgataggcttttggatcagctagcgcagattgaagct
aatggtattggaagaatggagaatccaccagcttcaaaagctgcaattgagtcattgcca
acaattgagataattcattctcatattgttgctgaatcttgttgtgcagtttgtaaagag
gcatttgagttaggcactgaggcccgcgaaatgccctgtaaacatttataccattcagat
tgcatactcccatggctttcgttgcgcaattcgtgtccagtctgtaggcatgaattgccc
tcggagagtcgggatgttgtcgatccgaatagagcaccaagcgaacagagtgagcagagt
gtagcaacaaataatgaggtggaagaagctgttggattgacaatatggagattacctggt
ggtggatttgctgttgggaggttaggtaggagaggtggggagagagctcttcctgttgta
ttcactgaaatggatggtggtttcaataataacaacaataatggagttccaaggaggatt
tcatggggttctagaggaagcgaatcgcgacaaagtggtggctttaggaggttttttggc
aacttgttttcgtgtttcggtggtattggttcatcagggtcaagctctagttcagattct
aggataaatcagagcagaagtagttcaatgtcatctgtctttcttgctacagcaagaagg
cgcagaggctggggtttcgaagctaataatggagttagaagatggtaa
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integrated database retrieval system
