Solanum lycopersicum (tomato): 101256882
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Entry
101256882 CDS
T02665
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101256882
04121 Ubiquitin system [BR:
sly04121
]
101256882
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101256882
Membrane trafficking [BR:
sly04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
101256882
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101256882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
HypA
Rad50_zn_hook
zf-RING_16
zf-RING-like
zf-HC5HC2H_2
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
101256882
NCBI-ProteinID:
XP_004240370
LinkDB
All DBs
Position
6:complement(738274..740659)
Genome browser
AA seq
385 aa
AA seq
DB search
MSSYWCYRCTRFVRISVGNDVVCPHCDSGFIEVAEGNIGSPESRRRFPMWNERPESDRSV
NMGSRRSRRNRGDRSPFNPVIVLRSPSEAPGEDEAAAAAEERSYELYYDDGEGSGLRPLP
PTMSEFLMGSGFDRLLDQLAQIEVNGFGRPENPPASKSAIESMPIIQIASNHVNSETHCA
VCKEAFDLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPTESTETTNSDNISRPR
NEDEAMGLTIWRLPGGGFAVGRFSGGRRGAERELPVVYTEMDGGFNNGVPRRIAWRSRRS
NTGRNGNGISRIFNNFTSFFRRLTPSSQHRSLSIHSSSSESSGSGSGSAVFRSRSVSSST
SIFSRYLRRSRRNWVPEERNGVTRW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtactggtgttatcggtgtacaaggtttgttagaatttcagttggaaacgat
gttgtttgtcctcactgtgatagtggatttatagaagttgctgagggaaatattgggtcg
ccggaatctcgccggaggtttcccatgtggaacgaacggccagagtcagatcggagtgtg
aacatgggttctcgacggagcaggcgtaatcggggtgatagatctccgtttaatccggtt
attgttcttcgtagtccatctgaagcacctggggaggatgaagctgctgcagctgcagag
gagcggagttatgagctttattatgatgatggtgaaggttcaggtctcaggccgttgccg
ccgacgatgtcggagtttttgatgggatctgggtttgatcggttacttgatcagttagca
cagatcgaggtgaacggttttggtcgcccggaaaatccaccggcgtcgaaatcagcgatt
gagtcgatgccgattattcaaatagcttcaaatcacgtaaattccgagacccattgcgct
gtttgtaaagaagctttcgatttaggatctgaagctcgagaaatgccctgtaaacacatc
taccattccgattgtatcctcccatggctatctcttcgaaattcgtgccccgtttgccga
cacgaattaccaacggaatcaactgaaactacaaactccgacaacatttctagacccaga
aacgaagacgaggcaatgggattgacaatatggagacttccgggaggtgggttcgccgta
ggaagattttccggtggaagaagaggagctgagagagagcttccagtagtgtatacagaa
atggacggtggatttaacaatggggtacctagaagaatagcttggagatcaagaagaagc
aacacaggtcgaaatggcaacggaataagccgaattttcaacaacttcacatcatttttc
cggcgattaacaccatcttctcaacatcgatctctatccatacattccagtagttcagaa
tcatccggttctggttctggatctgctgtattcaggagtcgaagtgtatcttcaagcact
tcaatattcagtaggtatttgagaagaagcagaagaaattgggtacctgaagaacgtaat
ggagtaacaagatggtaa
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