Solanum lycopersicum (tomato): 101256912
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Entry
101256912 CDS
T02665
Symbol
ubi3
Name
(RefSeq) ubiquitin-ribosomal protein eS31 fusion protein
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03010
Ribosome
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
101256912 (ubi3)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101256912 (ubi3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sly03011
]
101256912 (ubi3)
04121 Ubiquitin system [BR:
sly04121
]
101256912 (ubi3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101256912 (ubi3)
Ribosome [BR:
sly03011
]
Ribosomal proteins
Eukaryotes
Small subunit
101256912 (ubi3)
Archaea
101256912 (ubi3)
Ubiquitin system [BR:
sly04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
101256912 (ubi3)
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101256912 (ubi3)
Exosomal proteins of colorectal cancer cells
101256912 (ubi3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Plexin_RBD
Dsc3_N
DUF2604
UBL_UBAC1
TBK1_ULD
OTU1_UBXL
Fer2_3
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
101256912
NCBI-ProteinID:
NP_001333335
UniProt:
P62980
LinkDB
All DBs
Position
1:complement(73348085..73348758)
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDTGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaaccctaacggggaagacgatcaccctagaggttgagtcttcc
gacaccatcgacaatgtgaaagccaagatccaggacaaggaagggattcccccagaccag
cagcgtttgattttcgccggaaagcagcttgaggatggtcgtactcttgccgactacaac
atccagaaggagtccactctccatctcgtgctccgtctccgtggtggtgctaagaagagg
aagaagaagacctacaccaagccaaagaagatcaagcacaagaagaagaaggttaagctc
gctgtgttgcagttctataaggttgatgacactggaaaggttcagaggcttcgtaaggag
tgccctaatgctgagtgcggtgctggaacttttatggctaaccattttgaccgtcactac
tgtggtaagtgtgggctcacctacgtttacaacaaggctggaggcgattga
DBGET
integrated database retrieval system
