Solanum lycopersicum (tomato): 101256914
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Entry
101256914 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101256914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sly03032
]
101256914
03400 DNA repair and recombination proteins [BR:
sly03400
]
101256914
DNA replication proteins [BR:
sly03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
101256914
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
101256914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
ECT2_BRCT0
TopBP1_BRCT0
Motif
Other DBs
NCBI-GeneID:
101256914
NCBI-ProteinID:
XP_010320793
LinkDB
All DBs
Position
1:complement(73665976..73679623)
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AA seq
991 aa
AA seq
DB search
MMTTKVFNGANVFVSRNLVPPEQFDALHDALKLNGAQVLLCCDPSRNAPTDYHVISSPQH
EKFGDLQAKGCNLIGPQCVLSCAKEQRPLPQQGFTCCLAMDGVKILASGFEMDEKVEIGK
LVIAMGGVLQTKASLDVSFVIVKNVLAAKYKWAYNILKKPIVTINWLHQCWKEHRLVPQE
SFKILPFSGLTISVTRIPADERRDMEKIILQNGGKYSPELTRKCSHLICDVPEGDKFKVA
KRWGCIHTVTKRWFEQSVARRACLNEESYPVQSGSNTLSIVRMTNQHSLEKGIRNLQGLS
SLATASNAEPVFCSRVADSDLEATLSQNMSGTSSYVPVVTKEEENSPAEYPKSDYSAPVS
TKGEKSGASTEHDGCDGVVADDSETDDNDLYLADCRILIVGFNASEMRKLVNLVRKGGGS
RYMSFGEKLTHIIAGNPSENEIKELRNLAALGVIHVVKSGWLEDCDRENKEVPVLRKHIA
YDLLLPKDPIHCSNGAAITTTIKRQGKSYVHPMSSDEHAWRSRDSGCAMPSYESKEVENM
NDVRTSLGENGVQHQPYASNGKEEFKIPNESSCAVNGRKPSSVFEGRRFCFSASFPADRR
AEIVEWVNQGGGVVVKDQNETNLHFTIECHGMLRSEKDGAATTFVSSHWIKSCLEDGCLL
DVGDHILYSPLPCRVPFPAFKSFRLCVSQYDEKERQLLRNLCFTIGAKFVEKLTKKVTHL
LCKFTDGPKYEAACKWGIQPVTCEWIYECIKQNKIVSADPFYPKEVTSEDREAGACTVSQ
FPTQAFGMISGDTTSQPQTQPQELVNVRTEAFAGRNTAKEEKKYPSRWNKKARLFVVEEP
KCSLSCSPKESNAFCGASPPEKNLTGSTNEGSSAVPDVAAAIEDLLEQTSKIHDQKSPSR
SECDKELFTSGCNNLAQGHGDNHATLGLSNHWTNRFEKEDETHTHSGDATANVYDHFSET
QTDSQVVGYAEDLSGRQMIIDRVRTRSSGLT
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaacgaaggtcttcaacggagcgaatgtcttcgtgtcgcgtaatctcgtcccg
ccggagcaattcgacgcgcttcacgacgcgctcaagctcaacggagctcaagttttactc
tgttgcgatccttcacggaatgctcccactgattatcatgtcatttcttctccccagcat
gagaagtttggggatcttcaagctaagggctgcaacttgataggtccacagtgcgtactt
tcctgtgccaaagaacagaggccattaccccagcaggggtttacttgttgccttgcaatg
gacggggtcaaaatcctggcatctggttttgagatggatgaaaaggttgaaattggtaag
ttggtgattgcaatgggaggagtcctgcagacaaaagcatcattggatgtgagctttgtt
attgtgaagaatgttctagccgcaaagtataagtgggcttacaacattttaaagaaacca
attgtcactattaattggctccatcagtgctggaaagaacaccgtcttgttcctcaggag
tcattcaaaatccttcctttttctgggttgacaatttctgtcaccagaattcctgcagat
gagagaagggatatggaaaagattatcttgcaaaatggcggaaaatactctcctgagctg
accagaaagtgctcacatttaatttgtgatgttccagaaggtgacaaattcaaggttgcc
aaaagatggggttgcatacacactgttaccaaaaggtggtttgaacaatctgttgcaaga
cgagcatgtcttaatgaggagtcgtatcctgttcagtctggttcgaatactttgagcatc
gttagaatgacaaatcagcatagtctggaaaagggtatcagaaacctacaagggttgtcc
tccttggctacggcatcgaatgcagaacctgttttctgcagtcgagtggctgattcagat
ctggaagctaccctctcgcaaaatatgtctggtacatcttcgtatgttcctgtggttaca
aaggaggaggaaaactcacccgctgagtacccaaagagtgattacagtgctcctgtctct
acaaagggcgagaaaagtggagcatctacagagcacgatggttgtgatggtgttgttgct
gatgactctgaaacagatgacaatgatctttatttggcagattgcagaatcctaatagtt
ggttttaatgcatctgaaatgcgaaaacttgtcaatctagtccgaaaaggtggtggttct
cgttacatgtctttcggtgaaaagttgacacacataatagctggaaatccatcagagaat
gagatcaaagaattaagaaaccttgcggctttgggtgtcattcatgtggtaaaatcagga
tggctagaggattgtgatcgtgagaataaagaagttcctgttctaaggaagcatattgct
tatgatttacttcttcctaaagatcctattcactgtagtaatggagctgcaatcacgaca
actatcaaaagacaaggaaaatcctatgtgcatcctatgtcttcggatgaacatgcatgg
agaagcagggattcaggatgtgcaatgccatcatacgaaagcaaagaagtagaaaatatg
aatgacgtaagaacttctttgggagagaacggggttcaacatcagccatatgcttctaat
ggcaaagaagagttcaagataccgaatgaatccagttgtgctgttaatggtagaaagcca
tctagcgtgttcgagggaaggcgattttgcttttcagcttcatttcctgctgatcggaga
gctgaaattgttgagtgggtcaatcaagggggaggagtggtggtcaaagatcagaatgaa
acaaatttgcatttcactatcgagtgtcatggtatgttgcgttccgagaaagatggtgct
gcgactacttttgtatcaagtcactggattaagtcttgtctggaggatggatgcttgctg
gatgttggtgatcacatcctttattctccacttccatgccgagttcctttccctgcattt
aagagttttcgcttatgtgtttcacagtatgatgagaaagaaagacagttgctaagaaat
ttgtgttttactattggagccaaatttgttgagaaattaactaaaaaggtcacacatttg
ttgtgtaaatttaccgatggcccgaaatatgaggctgcatgtaagtggggaatacaacca
gtcacgtgtgagtggatttatgagtgtatcaagcagaacaaaattgtttctgcagatcca
ttttatcctaaagaagtcacctctgaagatcgagaagctggggcatgcacggtgagccag
ttccccacacaagcttttgggatgatatctggtgataccacatcccagcctcaaacccag
cctcaagaacttgtaaatgtgagaactgaagcttttgctggtagaaatactgcaaaggaa
gaaaagaagtatccaagcagatggaataagaaggctaggctctttgtggttgaagaaccc
aaatgttcattgtcctgctcaccaaaagaaagtaatgcattctgtggggcaagtccccca
gaaaagaacctgacaggaagtactaatgaaggttcttctgcagttcctgatgtagctgct
gcgatagaggacttattggagcaaacaagcaagatccatgatcaaaagtctccatcgaga
agcgagtgtgataaagaactttttacatctggttgtaacaatcttgctcaaggtcatgga
gataatcatgctacgcttggattgtctaaccactggacaaacaggtttgagaaagaggat
gaaacccacactcattcaggagatgcaactgcaaatgtgtatgatcactttagtgaaaca
cagacggactctcaggttgttgggtatgctgaagatttgtctggaagacaaatgattatt
gatagagtacgaacaaggagttctggattgacttaa
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