Solanum lycopersicum (tomato): 101256990
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Entry
101256990 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101256990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101256990
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101256990
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
101256990
NCBI-ProteinID:
XP_019070334
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Position
7:complement(62504047..62509824)
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AA seq
283 aa
AA seq
DB search
MTWVLTPNQLVLLIDDASLRGEVMHYLYEKKDSCKNRALLLWNSFNTVYMLLLVMANNPE
TRTGLIKAEIPCYFYPFLKPCGDDKHMECVRTTTLGVLNDLTKFDDPHGSHALCFFLESE
VVPLCLKCIDVYDKKSQKLATLIVMNILTQESGLTYCSATPECFFSIVQVLRRVVEKLSL
KTCLLHLEYVIQCYVCVSKIYRSIGPCDELIRQIPPQLFDNTFRRTLLHNHEASWMLQVL
LSIFMDVYIFRQLKREKGLQRRLHQVMHQVQRVRERERSEVVL
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgacttgggtgctcaccccaaatcagttggttctattgatcgatgatgctagtcttcgt
ggagaggtcatgcattacctctacgagaagaaagattcatgcaaaaatcgagctctgctg
ctgtggaacagcttcaacacagtttacatgcttttgctggttatggctaataacccagaa
acaagaacggggctcataaaagctgaaataccatgttatttctatccatttctcaagccg
tgtggagatgataagcatatggagtgtgtgaggaccactaccttgggtgttctcaatgac
ctgacaaagtttgatgatccacatggatcacatgccctttgtttcttcttggaatcggaa
gtggttcctttgtgcctgaagtgcattgatgtatatgacaaaaagtcacagaagcttgca
actctcatagttatgaatattctgacgcaagagagtggacttacctattgttctgctacg
cctgaatgcttcttctcgatagtacaagtcttaagacgagtggttgagaaactttctctc
aaaacttgtttgctgcatctagaatatgtgatacagtgttatgtatgtgtgtcaaaaata
tataggtccatcgggccatgtgatgaattgataagacaaattcctcctcagctatttgac
aacaccttcaggcgcactcttctccacaaccacgaagcttcgtggatgttgcaggttcta
ctctcaatatttatggatgtctatattttccgccaattgaagagagaaaaaggattgcaa
agaaggctgcatcaagttatgcatcaagttcaaagggtaagggaaagagaaagaagtgaa
gttgttctgtag
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