KEGG   Solanum lycopersicum (tomato): 101257278
Entry
101257278         CDS       T02665                                 
Name
(RefSeq) RING-H2 finger protein ATL43
  KO
K19041  E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sly04121]
    101257278
Enzymes [BR:sly01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101257278
Ubiquitin system [BR:sly04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101257278
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX Prok-RING_1 zf-RING_16 Prok-RING_4 zf-RING-like zf_RING_Vps8_fungal zf-RING_4
Other DBs
NCBI-GeneID: 101257278
NCBI-ProteinID: XP_004242728
UniProt: A0A3Q7H6Z7
LinkDB
Position
7:3761304..3763295
AA seq 422 aa
MNIYNVYFLSLSLWLLMITVMLNAQEIAESPSPPPPPYYRSRGSPFRPSIVIVVAILTTI
FSIVFMLLLYAKHCKREGEFGMTGGGGGLTNAGSSSFRKNSGIDRTVIESLPVFRFGSLR
GQKAEGLECAVCLNKFESTEILRLLPKCKHAFHIECVDTWLDAHSTCPLCRYQVDPEDIL
LISHENERKSDSTACSASPAKEKRMYSSSSGRHSSAGERGTSSSSLQIIVETPKQETPSF
LNKRMSLDSWNFYRKKSKSTNSTSLSRKDGMLLSKKKAPAPAPATEPEVEERRLEHRIII
SGDEPELDTASGSRQRWSDVEACDRLYLRSEMLLSESRRYSGSRKRTAEMESGRRVINER
SVSELTGMSRFKSNNNNNEEERERKGAVKRWLDWISQSQNKSMSDSGASVGAGATTSSFS
AS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaacatttataatgtttattttctttcgctttctttgtggctgttgatgattactgtt
atgttaaatgcacaagagattgctgaatcgccgtctccaccaccaccaccgtattataga
tctagaggttcgccttttagaccgagcatagtaatagtagtagcaatactcacaactata
ttctcaatcgtgtttatgttgttgttatacgcgaagcattgtaagagggaaggtgaattt
ggtatgacgggaggaggaggaggattgacgaatgcaggttcatcgagctttcggaagaac
tccggtattgatcggacggtgattgagtcgttgccggtgtttcgatttggatctcttaga
ggtcaaaaagctgaaggacttgaatgtgctgtttgtttgaataaattcgaatcgactgaa
attctccgattgttaccgaaatgtaaacacgcgtttcatattgagtgcgttgatacttgg
cttgatgctcattctacttgtcctctttgtcgatatcaagttgatccagaagatattctg
ttaatttcacatgaaaatgagagaaaatctgattctaccgcatgttcagcatctccggcg
aaggaaaagaggatgtattcttcatcttctggaagacattcttccgccggagaaagagga
acttcatcgtcatcgttgcagataatcgttgaaactccgaaacaggaaacgccgtcgttt
ctgaacaagagaatgtcgttagacagttggaatttctaccggaaaaaaagcaaatccact
aattcgacttcgttatcgagaaaagacggaatgctattaagcaaaaagaaggcgccggcg
ccggcgccggcgacggaaccggaggtggaggaaaggcggttggaacaccgaatcattata
tccggcgatgaaccggagctggacacggcaagtgggtcccggcaacggtggagtgacgtg
gaggcttgtgataggttgtatttgaggtcggagatgttattaagcgagagccgtagatat
tcaggatcgagaaaacggacggcggagatggagagtggcagaagggtaataaatgagaga
agtgtgtcggaattgacagggatgagtaggtttaagagtaataataataataatgaagaa
gaaagagaaaggaaaggagcagtgaaaaggtggttggattggatatctcaatcacaaaac
aaatctatgtctgattcaggtgcaagtgttggtgcaggtgcaacaacttcttcattttca
gcatcatga

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