Solanum lycopersicum (tomato): 101257955
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Entry
101257955 CDS
T02665
Name
(RefSeq) ras-related protein Rab7
KO
K07897
Ras-related protein Rab-7A
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04144
Endocytosis
sly04145
Phagosome
sly04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101257955
04145 Phagosome
101257955
04148 Efferocytosis
101257955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101257955
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101257955
04031 GTP-binding proteins [BR:
sly04031
]
101257955
Membrane trafficking [BR:
sly04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
101257955
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101257955
Exosomal proteins of other body fluids (saliva and urine)
101257955
Exosomal proteins of colorectal cancer cells
101257955
Exosomal proteins of bladder cancer cells
101257955
GTP-binding proteins [BR:
sly04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
101257955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
RsgA_GTPase
cobW
ATP_bind_1
AAA_16
Septin
nSTAND3
AAA_22
AAA_7
AAA_24
PduV-EutP
DAP3
NACHT
NTPase_1
nSTAND1
Sigma54_activat
DUF5050
MCM
NB-ARC
ATPase_2
AAA_5
Motif
Other DBs
NCBI-GeneID:
101257955
NCBI-ProteinID:
XP_004237840
LinkDB
All DBs
Position
4:complement(60879927..60890238)
Genome browser
AA seq
204 aa
AA seq
DB search
MSIRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDNLDNWHEEFLKQANPPDPKTFPF
ILLGNKIDIDGGNSRVVSEKKAKEWCTSKGIPYFETSAKEDINVDAAFLSIAKTALANEH
EQDIYFQGIPEAVSETEQRGGCAC
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgtctattcgtagaagaaccttgcttaaagttatcgtccttggcgatagtggggttggt
aaaacgtcattaatgaatcaatatgtacacaagaagttcagtcagcaatataaagctaca
attggagctgatttcgtgacaaaggagcttcaaattgatgacaggcttgttacactccaa
atatgggatacggccggtcaagagagattccagagtcttggagttgcattttatagaggt
gcagattgctgtgttttggtctatgatgttaatgtaatgcgatcctttgataaccttgac
aattggcatgaagaatttctcaaacaggctaatccgccagaccctaaaacatttcctttc
atattactggggaacaagattgatatagatggtggaaatagccgagtggtttctgagaag
aaagcaaaggagtggtgtacttctaaagggataccttactttgagacatcagcaaaagag
gatataaatgttgatgctgcattcttgtctattgcaaaaactgccttggccaatgagcac
gagcaggatatatacttccaaggcattccagaggcagtttcagagactgaacaaagaggt
ggctgtgcatgctaa
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