Solanum lycopersicum (tomato): 101257965
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Entry
101257965 CDS
T02665
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101257965
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
101257965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
101257965
NCBI-ProteinID:
XP_010321042
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All DBs
Position
5:complement(16798887..16848447)
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AA seq
1608 aa
AA seq
DB search
MLRVPVSTPSSGEMEHNNTHQLRSRSHQQFHPSRPAILDLFNLYLGLKNSGQKSDDSIRE
PPNKTQKRVTALNRELPPRNEQFILDFGQLQSQFTDKEQLSAVAESVLISLVIHCSSHAP
RAEFIQFAICSLSSIGFINWDSFLPSLLSSVSSTEISASQANLPSAAVSSANLTSGLLPS
STTVASTSIFHSSNPASPLPAVHGIGSPLHSVAEPSSSAALSPMKSSDVNGTSQQSVAKV
NLLLNDNATSSLRQLCCKIILTGLDSNLKPVTHAEVLHHMLNWLINWDQKLHGIDELDST
KYWKPDKALIKWLHSCLDVIWLLVENDKCRIPFYELLRSGLQFLENIPDDEALFTLILEI
HRRRDMMAMHMQMLDQHLHCPTFGTPRLLPQASANSSGEAVANMRYSPITYSSVLGEPLH
GEDLAASIQKGSLDWERALRCLKHALRNAPSPDWWRRVLLVAPCHRVHAQAPTPGAVFTS
EMVCEAVIERIVELLKLTNSEINCWQEWLIFSDIFFFLMKSGCVDFVEFVDKLVFRLQEG
DQQILRTNHVTWLLAQIIRVELVMNALNTDSRKVETTRKILSFHKEEKSSDPNNPQSILL
DFISSCQNLRIWTLNTATREYLNNEQLQKGKQIDEWWRQVNKGERMMDYMNLDDRSIGMF
WVVSYTMAQPACETVMNWLTSAGVTEHLPGPNLQSNERLMVMREVCPLPISLLSGLSINL
CLKVAFQLEESMFSGQAVPSIAMVETYCRLMLISPHSLFRSLLTHLTSRNPTTLTKPGNT
ILVFEILNYRFLSLYRYQGKSKTLMYDVTKMISTLKGKRGDHRIFRLAENLCMNLILSLR
DFFFVKREGKGPTEFTETLNRITIVTLAIIIKTRGIGEFEQLLYLQTMLEQILATSQHTW
SEKTLRYFPSILRDALSGRMDKRGLAIQAWQQAETTVINQCTQLLSPSADPSYVVTYINH
SFPQHRQYLCAGAWILMHGHPENINCTNLGRVLREFSPEEVTANIYTMVDVLLHHIHLEL
QRGHPLQDLMLKACGNLSVFIWNHELLPPDILLLALIDRDDDPHALRIVINLLDSKELQQ
RVKVYLLNRGPPEHWLSPGPFKRVELQKALGNYLSWKERYPTFFDDIAARLLPVIPLIIY
RLIENDAMDAADRILQVYSPFLHYYPLNFTFVRDILSYFYGHLPGKLILRILNILDIKKI
PFSESFPQHINSSNAAMCPPLDYFATLLLGLVNHVIPALNNSSKCAVMGDFANNSTRAPH
GKIPATSQSGTTNSFDGQKPYYQMQDPGISTQLTLETAVIELLSLPVSPSQIVSSLVQIV
VHIQPTLVQSSNGLHGAPGSSGQGSILPTSPSGGSTDSLGATRTTPSLSGLNTSNFVSRS
GYTCQQLSCLLIQACGLLLAQLPPEFHVQLYVEAARIIKESWWLTDAKRSVGELESAVSY
ALLDPTWAAQDNTSTAIGNIVALLHAFFCNLPQEWLEGTHLIIKHLRPVTSVAVLRISFR
IMGPLLPRLVNAHTLFSKTVSLLLNILVDVFGKNSQLSAPIEATEISDLIDFLHHVIHYE
VASSKPRSEILALFGRAAENLRPDVQHLLSHLNTDVNTSVYAKIIHNA
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgagttcccgtttccactccaagcagcggagaaatggagcataacaacacacac
cagttgaggtctcggtcccaccaacagtttcatccctctcgacctgccatccttgatctc
ttcaatttatacttaggactgaaaaattctggacaaaaatcagatgattctatcagagaa
ccaccgaacaagacacagaagagagtaactgctcttaacagagagcttcctccacgaaat
gagcaatttatcttagattttggacagctgcagagccagtttactgacaaggaacagcta
agtgcagtggcagaatctgttcttatttccctcgttattcattgcagtagtcacgcacct
cgtgcagaatttattcaatttgccatatgtagtttgtctagtataggattcataaactgg
gattctttcttgccttctcttctttcctccgtttcatcaactgagatatccgctagccag
gctaatctaccatctgctgctgtctcttctgctaatttaacatctggattgctcccttct
tccaccacagtagcgtctacctccatttttcactcatcaaatcctgcatctcctttgccc
gctgtccatggtattgggtcccctcttcattcagtagctgaaccctcatcttctgctgct
ttgtctcccatgaagtcttctgatgttaatggtactagccaacagtctgttgcaaaagtg
aatttgttgttaaatgataatgctacaagcagtctgcgtcagttatgttgcaaaattatt
ttaactggtctagattctaatcttaagccagtaacacatgccgaagttctccaccatatg
ttgaattggttgattaattgggaccaaaagttacatggtattgatgaattagacagtacg
aaatattggaaaccagataaggccctaattaagtggctacacagttgtttagatgttatt
tggttgctggttgagaatgataaatgccgtataccgttttatgaacttctccggagtggg
ttgcagtttttagaaaatataccagatgatgaagctctgttcactcttattttggagatc
catcggaggcgagatatgatggctatgcatatgcaaatgttggatcagcaccttcactgc
cctacatttgggacccctcgacttcttcctcaagcctctgcaaattcgtctggtgaagca
gttgctaacatgagatattcaccaattacatattctagtgtgcttggggaaccattgcat
ggagaggatcttgcagcttccattcaaaaaggaagcctggattgggagcgagctttgcgt
tgtttaaagcatgcacttcggaacgctccatcaccagactggtggagacgtgtgcttctt
gtggctccctgtcacagggttcatgcccaggctccaactccgggtgctgtgtttacatcg
gaaatggtttgcgaggcagttattgaaagaattgttgaattattgaagttgacgaattca
gaaatcaattgctggcaggagtggcttatattctctgatatattcttttttctcatgaaa
agtggatgcgttgattttgtggagttcgtggacaaattagtatttcgacttcaagagggt
gatcaacaaatacttaggacgaaccatgttacgtggttacttgcacaaattattcgggtt
gaactagtgatgaatgctctaaatacagactcaagaaaggtggagacgaccagaaaaatt
ctttcgttccataaagaggagaaaagctctgatcccaataatcctcaaagtatcctactt
gatttcattagcagttgtcagaacttgcgcatttggacactaaatacagcaacaagagaa
tacctgaataacgagcagctacaaaaaggaaagcaaattgatgaatggtggagacaagtt
aacaaaggggaacgcatgatggattatatgaatttggatgatagatcaattgggatgttt
tgggttgtgtcctacacaatggctcagcctgcttgtgaaactgtgatgaactggttaacc
tccgcgggggttactgagcatttacctggaccaaatttgcagtccaatgagagattaatg
gtgatgcgtgaagtttgccccctgccgatatcattgttatcaggattgtccataaattta
tgcttgaaagtggcttttcaattggaagaatcaatgttttctggacaggctgtgcccagc
atcgctatggttgaaacatactgtaggttgatgctcatttcccctcattcattgtttcgt
tcgctcttaacccatctgacatcgaggaatcccaccacattgaccaagccaggaaacaca
atcttggtgtttgagattcttaattatcgtttcctttcactctacaggtaccaaggtaag
agcaagacattgatgtatgatgtcaccaaaatgatttctacactgaagggaaaacgcgga
gatcatcgcattttcagattggctgagaacttatgtatgaatctgattttgtcgttgaga
gactttttctttgtgaagagggaagggaagggtccaactgagtttactgagactttaaat
aggataacaattgttactcttgcaatcataattaaaactcgtggaattggagagttcgaa
cagttactgtatcttcaaacaatgctggaacaaatcttagcaactagccagcatacctgg
tctgagaaaactttgcgctattttccttcaattttacgtgatgccttgagtgggcgaatg
gataaaaggggcttggcaatccaagcatggcagcaggcagaaacaactgttatcaatcaa
tgcacacagcttctttctccctcagctgatccctcatatgttgtgacttatattaaccat
agttttcctcagcaccgccagtatctctgtgctggtgcatggatactaatgcatgggcat
ccagaaaatattaactgcacaaaccttggacgtgttttgagagagttttctcctgaagag
gtgactgcaaatatttatacaatggtagatgtcctgcttcatcatattcacttggaacta
cagcgtggacatcccttgcaggatcttatgctaaaagcctgtggaaacctttcagttttc
atctggaaccatgagcttttgcctccagatatcctactgctggcacttattgaccgtgat
gatgatccacatgctttgcgcattgtaattaacttacttgacagtaaggagctccaacaa
agagtgaaagtttatctcttaaatcgtggcccgcctgagcattggctttcccctggacct
ttcaagcgtgtggaattgcagaaagctcttggaaattatctgtcatggaaggagaggtat
ccaacattttttgatgatattgctgcacgcctgcttccagtcatcccccttatcatatat
agactcattgaaaatgacgctatggatgcggctgatagaattcttcaagtttattcaccc
ttccttcattactatcctctgaactttacgtttgttcgtgatatactttcttatttctat
ggtcatcttcctggaaagctaatactccgtatactgaatatcttagatattaaaaagata
ccattttcagagtcattcccgcaacatatcaactcatcaaatgcagccatgtgcccacca
ttggactacttcgctactcttttgttaggactggtgaatcatgttattcccgctttaaat
aatagctccaaatgtgcagtgatgggagattttgcaaataattctacccgtgctccccat
ggaaagatcccagcaacatcacaatctgggacaactaattcttttgacgggcagaaacct
tattatcagatgcaagaccctgggatatccacccagcttactcttgaaacagctgtcata
gaattactttctcttcctgtttcaccatcacagattgtctcatctctagttcaaattgtt
gttcacatacaaccaacccttgttcaatccagcaatgggcttcatggagctcctggtagt
tcaggacaaggctctattttgcctacttctccttcaggaggaagcactgattctttgggt
gcaactaggacgactccatcactttcaggattgaatacttctaattttgtttcacgcagt
ggttatacttgccagcagctgtcttgcttgttaatccaagcatgtggtcttcttttggca
caacttcctccagaatttcatgtgcagctatatgttgaagctgcacgcataataaaagaa
agttggtggcttactgatgctaaaaggtctgtgggtgaattagaatcggctgttagttat
gctctactagatcccacctgggctgcacaggataatacctcaacagccattggtaatatt
gtcgcactgctacatgctttcttctgtaacctcccacaagaatggctcgagggaactcat
cttatcattaagcaccttaggcctgtgacatctgttgcagtattaagaatatcatttcgc
attatgggtcccttgcttccgaggttggtaaacgctcatacccttttcagtaagacagtg
tcgctgcttttgaatattttggtggatgtgtttgggaagaactcacagctgtcagcacct
attgaagcaacggaaataagtgatcttatcgacttcctgcatcatgttattcattacgag
gtcgcatctagtaaacccagatcagaaattttggctctttttggaagagcagcagaaaat
ttgcgtccagatgttcaacatcttctttcccacctcaacactgatgtaaacacttcggtt
tatgcaaaaatcatccacaatgcttaa
DBGET
integrated database retrieval system
