Solanum lycopersicum (tomato): 101258067
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Entry
101258067 CDS
T02665
Name
(RefSeq) recQ-mediated genome instability protein 1-like isoform X3
KO
K10990
RecQ-mediated genome instability protein 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
101258067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sly03400
]
101258067
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
101258067
FA (Fanconi anemia) pathway
101258067
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Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Hanta_Gc_C
DUF538
Motif
Other DBs
NCBI-GeneID:
101258067
NCBI-ProteinID:
XP_004239179
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Position
5:complement(8564381..8570233)
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AA seq
640 aa
AA seq
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MNRRRHQIICSSDEEDGDDEPQQFAGGNEENENPNNIEIEILESSTNFQSVTLNSPIQNP
TPNREPNVDVSEVVRAADCGIGRALEGLGLRLRREWLESCVGGLEGSVVGEFSGLDDTTK
AKLCFEQFLYSDMNFCGAGMLPKDVHKLHLVDLKGPFVLQVDEIVNISCPLRDRYQKVAA
GIKRCLKLSMTDGIQRVFGMEYRPIKDLDVLSPSGLKVAICHVHVRHGILMLVPEVIEVL
GGMVEELEEARKRLVNEINKPPRGKRTRSGVVPPLATRATAAAWPREGVTVPEHSDTSSR
QNMHFQVHERGTSGSATTATEEIHPVTSGLPYSTSFTTPVYRREAQSNFPSTPAVSVPFN
RNIGPTFSSDAASHAEDIHMADMTTEGIDVPIRREHNDPVLSSSSSMEVEELLSDIRSDP
ATPASSRSRGSIRVSSDSFHYEDVTPDTLSTAAIDVDEIDLVDELDHPYILSGAKENPFT
YLASLSAKQAGMHGSASTVTGKIKCFLTGVKGFQYKQSSKYELRVYVDDGSLISEILIDH
ALVQEKIGFSPAEVNAALSSSDRKRVSDTKETLKCFQKFLINFEGTMLVHLNEESPIPVA
TEMNQGCSASDAWLLLKRLKPSTSPRQHHLHHSETINLSP
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaagacgccaccaaatcatctgttcctccgacgaagaagacggcgacgacgag
cctcagcaattcgccggcggcaatgaagaaaatgaaaatcctaacaacatagaaattgaa
attctagaatcgtctactaacttccaatcagtaaccctaaattctcccatccagaaccct
acacctaatcgtgagccaaacgtcgacgtttctgaagttgtacgagctgcggattgtggc
attggtcgggcattggaaggattagggctaagattgcggagggaatggttagaatcatgt
gttggaggacttgaaggatcagtagtaggagagttttctggattggatgatacgacgaag
gcgaaactttgtttcgagcagtttttgtactcggatatgaatttttgtggtgcaggaatg
cttccaaaggacgttcacaagctgcatttggttgatcttaaagggccctttgttcttcag
gtagatgagattgtgaatatcagttgtcctcttcgagataggtatcagaaagtagctgct
ggaataaagaggtgtctgaaattgtccatgactgatggtattcaacgagtgtttgggatg
gagtacaggcctataaaagacctcgatgttctgtctccttctggactgaaggttgctatc
tgtcatgttcatgttaggcatggaattctgatgttggtccctgaagttattgaagttctg
ggtgggatggtggaagagttagaagaagcaaggaagcggctagttaatgaaataaataag
ccaccgagggggaaaagaacaaggtctggcgtggttcctcctttggcaactagagctacc
gctgctgcatggccacgagaaggtgttactgttccagagcactctgatacttcctcaaga
caaaatatgcattttcaggttcatgaacgaggaacatctggcagtgctactactgcaact
gaagaaattcatcccgttacatctgggctaccatattctacgtcattcaccactcctgtt
tatagaagagaggctcaatctaatttcccatctactccagctgtttctgtcccattcaat
aggaacattggacctaccttttcatctgatgcagctagtcatgcagaggatatccatatg
gctgacatgaccaccgaaggcattgatgttccaattagaagggaacataatgaccctgtc
ctttcatcttcttcttccatggaagtggaggaacttttgtcagatattagaagtgaccct
gccacacctgccagtagcaggagcagaggaagcattcgtgtctctagtgatagtttccat
tatgaagatgtaacaccagatacattgtctactgcagcaattgacgttgatgaaattgat
ttggttgatgaattggaccatccatatatactttctggagcaaaggaaaaccctttcact
tacttagctagtctgtcagctaagcaggctggtatgcatggcagtgcttccactgttaca
ggaaaaattaagtgctttcttactggtgtgaagggatttcagtataaacagagtagtaaa
tacgagcttcgggtttatgttgatgatggcagcctaatctctgagatccttatagatcat
gctcttgtgcaggaaaaaataggcttttctcctgcagaggtaaatgctgctcttagttct
tcagatagaaaacgagtcagtgacacgaaggagacactgaaatgtttccagaaattcttg
attaattttgagggaacaatgcttgttcatttgaatgaagaatctccaattccagttgct
actgaaatgaaccaggggtgctctgcctctgatgcatggttgcttctcaaaagactaaag
ccttctacttctccgcgacaacatcatcttcatcactcagaaaccataaatttatcccct
tga
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