KEGG   Solanum lycopersicum (tomato): 101258122
Entry
101258122         CDS       T02665                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    101258122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sly04121]
    101258122
   03036 Chromosome and associated proteins [BR:sly03036]
    101258122
Enzymes [BR:sly01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101258122
Ubiquitin system [BR:sly04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101258122
Chromosome and associated proteins [BR:sly03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     101258122
    Noncanonical PRC1 (PRC1.1)
     101258122
    Noncanonical PRC1 (PRC1.3/1.5)
     101258122
    Noncanonical PRC1 (PRC1.6)
     101258122
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-UDP zf-RING_4 zf-rbx1 zf-RING_6 RAWUL zf-Nse TRAF3_RING zf-C3HC4_5 ZNF512_C2HC zf-RING_11
Other DBs
NCBI-GeneID: 101258122
NCBI-ProteinID: XP_004232907
LinkDB
Position
2:complement(58913336..58922300)
AA seq 459 aa
MPAQKRPYETSPTPPPPDEKDDDSLKGNQNHDEDADDSGGEDSDGTTCSSGGEKDEFITV
RLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRMGNNECPACRTHCASRRSL
RDDPNYDALIAFLYPDIDKFEEEEFAFHEEDKALNKQIQASIAQTSQRQSEALGRKRSAR
AAAFTRRSQGNYRNLRGRRNYQGAEHHISDEEEDGNHDVGKDSSSADERSIEVKPKRQKK
RAGRPSQASAASEENDAETNQESFGACSGLIRCSEILAWGKGGMRSNNRHGGLGGGIGKV
SRNSRVSKLIASLSRSDEYEGKLDARLMLVSFSEEDIPSLQRPYLSCQPTMEVKHLRQYV
AQQTSIEVGEIDIVLIKEKNPTDNPSSSDIMAISKPIVGDPSKAEIQTVEEHQTLGEIQE
TFGLNQRNLILAYQRKAKNGTDHDEVKGDNVILAIQNII
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgcctgcacagaagcgtccgtacgaaacttctcctactcctccgccaccggacgagaag
gacgatgattcgttaaaaggtaatcaaaatcacgacgaagatgccgatgacagcggcggc
gaagattcggatggaactacttgttcgagcggcggggagaaagacgaatttatcactgtg
agactttcagaaattcgcaaagaagtacagtgtcctatatgtttaggcatcatacggaag
accagaacagttatggaatgtttgcatcgattttgcagagaatgcattgacaagtctatg
cgaatggggaacaatgagtgtcctgcttgtcgtacccactgtgctagtcgccgttctctg
agagatgatccgaactatgatgctctaattgcatttctatatccagatattgataaattt
gaggaggaggaatttgcttttcatgaagaggataaagctttaaataagcagatacaagct
tcaatcgcacaaacgtcacagcgacaatccgaagcactgggaaggaaacggtctgcaaga
gcagcagcttttacgaggagatctcagggaaactatcggaatttaaggggaagaagaaat
tatcagggtgctgaacaccatatatctgatgaggaagaagatggtaatcatgatgttggc
aaggattcttcctctgctgatgagcgctcgatagaagtcaaaccaaagcggcagaaaaag
agggcaggacggccttctcaggcctcagcagccagtgaagaaaatgatgcagaaacaaac
caagaatcatttggtgcatgtagtggacttattcgctgttcagaaattcttgcctgggga
aaaggtggcatgcgaagtaacaacaggcatgggggtcttggtggaggcattggcaaagtc
tccaggaacagcagagtctcgaagctaattgcttctctatctcgttcagatgaatatgaa
gggaagttggatgccagacttatgcttgtttccttttccgaggaggatataccaagtttg
caacgaccttaccttagttgccagccaactatggaagttaaacatttaagacagtatgta
gctcagcagacttccatagaagtcggggaaattgacatagtgctgataaaagagaagaac
cccactgacaacccttcaagttctgatatcatggccatttccaaacccattgttggagat
ccttctaaagcagaaatccagactgtggaagagcatcagacactgggagaaatccaagaa
acatttggtttgaaccagcgtaatctgatcttagcataccaacgaaaagcaaagaatggg
acagaccatgatgaagtgaagggtgacaatgtaattttggctatacaaaatataatataa

DBGET integrated database retrieval system