Solanum lycopersicum (tomato): 101258139
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Entry
101258139 CDS
T02665
Name
(RefSeq) katanin p60 ATPase-containing subunit A1-like isoform X1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sly04812
]
101258139
Enzymes [BR:
sly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
101258139
Cytoskeleton proteins [BR:
sly04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
101258139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
AAA_lid_3
RuvB_N
AAA_16
TIP49
AAA_5
Mg_chelatase
AAA_33
AAA_14
PhoH
AAA_18
EF-hand_7
IstB_IS21
EF-hand_1
AAA_7
EF-hand_6
RNA_helicase
AAA_28
nSTAND3
AAA_22
AAA_3
AAA_17
TFIIA
Motif
Other DBs
NCBI-GeneID:
101258139
NCBI-ProteinID:
XP_019066956
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All DBs
Position
12:complement(55111339..55115997)
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AA seq
562 aa
AA seq
DB search
MMKKQKLENYQMVGVDAAKSKEEKMKIIFDKFDVNKDSHLGITELLGWIMAVEPTLSNDL
QRLPFLLQIYLGNPSFLAGSKGLSYSGFTNIYEEGHRNIDHDFNTINIQPPIHQGYVVRG
ILQQQQQRSLMLQSQLQQQQQYQQQEQHRSWMLQSQLVQQQAQQRASLATNTFSNNHRNT
TQQVGGGISSAGPVSNIGITAQQMGRVISSAVQVNSYGNTMQQVGGNLNSADEVNKNVNP
AEQENAVKDVKSKVKYDGSHPKLAARLEKEILDTNPGVKWDDVAGLSEAKRILQETVVLP
LFMPEYFQGIRRPSRGVLMFGPPGTGKTLLAKAVATECGMTFMNISCSSLCGNWYGESER
LTRCLFELARAHAPTMIFIDEIDSLCSVRGSATKHETSRRLKSELLVQIDGLNNSNSTSG
KMVTLLAATNFPGNLDEALRRRLEKRIYIPLPDFETRKELIQINLKLIELAPEVDIEQVA
QKTEGYSGDDLTNICRDASLNGMRQKIAGKTIDESKNILKSEILKIPVTMEDFLEAVDKI
KPTVSSGDIQRHQKWYSEFGSS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaaacagaagctcgaaaactatcagatggtgggtgtggatgctgcaaagagt
aaagaggagaagatgaagataattttcgacaagtttgatgtcaacaaagattcacattta
gggataacagagttgttaggatggatcatggcagttgaacccacattaagtaacgatttg
caaaggcttccatttctccttcaaatatacttgggtaacccttctttcctagctggttca
aaaggactatcctatagtggtttcactaacatttacgaagaaggtcatcgtaacattgat
catgacttcaataccataaatattcagcccccaattcaccagggatatgtcgttcgaggt
attttacaacaacaacaacaacgtagcttgatgcttcaatcacaactacaacaacaacaa
caataccaacaacaagaacaacaccgtagttggatgcttcaatcacaattagtacaacaa
caagcacaacaacgtgcaagtctagcaacgaatactttttcaaacaaccacagaaacaca
acgcaacaagtgggtggagggattagctctgctgggccggtgtctaatattgggatcaca
gcacaacaaatgggaagagtgatcagctctgctgtgcaagtgaatagttatggaaacaca
atgcaacaagtgggaggaaatctcaactctgctgatgaggtgaacaaaaacgtaaaccca
gctgaacaagagaatgctgtaaaggacgtcaagtcaaaagtaaagtacgatggatctcat
cccaaattggctgctaggcttgaaaaggaaatattggacacaaatccaggggttaaatgg
gatgatgttgctggactaagtgaggcaaagaggattctacaggaaacggtggtactccca
ctgtttatgcctgagtatttccagggaatcaggagaccttcgagaggagttcttatgttt
ggtcctcctggcacagggaaaacactcttggccaaagctgttgctacagagtgtgggatg
acatttatgaatatttcctgtagttcattgtgtggaaattggtatggagagagtgaacga
ttgacacggtgcttatttgagcttgcccgtgctcatgctccaactatgattttcattgat
gagattgattctctttgcagtgtcagagggtctgctacaaagcatgaaacatcccgaagg
ttaaagtctgaacttttagttcagatcgatggattaaataactctaatagtacatcaggt
aaaatggtgacacttttggcagcaacaaatttccctgggaatcttgacgaggcactaagg
aggaggctagaaaagcggatttacatcccacttcctgattttgagacccgtaaggagctt
atacagataaacttaaaattaatcgagttggctcctgaggtggatattgagcaagtggca
caaaaaacagaaggctacagtggagatgatctaacaaacatctgcagagacgcttccttg
aatggcatgaggcagaagatagctgggaaaaccatagacgagagcaagaacatattgaaa
tcagaaatactgaaaattccagttacaatggaagacttcctagaagctgtagataaaata
aagcccacagtttcttcaggggacattcaacgacatcagaaatggtactcagagtttgga
tcatcatag
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