Solanum lycopersicum (tomato): 101258141
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Entry
101258141 CDS
T02665
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101258141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101258141
03036 Chromosome and associated proteins [BR:
sly03036
]
101258141
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101258141
Coactivators
SAGA/TFTC/STAGA complex
101258141
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101258141
STAGA complex
101258141
TFTC complex
101258141
SAGA complex
101258141
SLIK complex
101258141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
101258141
NCBI-ProteinID:
XP_004235568
LinkDB
All DBs
Position
3:66852042..66861051
Genome browser
AA seq
642 aa
AA seq
DB search
MAEIPSSSPKLTQPSNPIMDTTNQVTAGGAAPSTTSSNPGITMTSPSNNNSIAQSPSIDL
PQIPLAQSQQQQHQHQIQMPQPQQMQQQQQQQLTQSQQQQQQQQQMQLQQQQSNSSNLNG
SNSNLMSASNFQMQQNLQRSPSMAARMSQLQMQQQQQQFGLMRQQSGGLYGQMNFGVGGT
SLQQQQQQQLQQQQLQQQFQQQQQQQQQQNQQQQQIGGQMGSGNLARAALMGQTGHLPML
SGQAAAAAAAVAQFNLQSQFLNSPRQKAGLMQGNQFHTGNSHGQSLQAMGMMGSLNMSSQ
LRANGALAYAQRVNQGQLRQQQLSQQNPLTTTQKISAQSLPRTSFANSQLPGLTQNGQSA
IMQNNSSQQQWLKPMPAISTPNSPSFRLQQQRQQMLLQHQNSMGLNPQQLSQIVQQQQQI
GHPQMHQQQQQQQQQQQLSHQQQSSPRMAAPAGQKSLSLTGSQPDATGSGTTTPGGSSSQ
GTEASNQLLGKRKIQDLVSQVDAQGKLDPEVEDLLLEIADDFIDSVTTFACNLAKHRKSS
TLESKDVLLHLEKNWHLTIPGFSSEERKQYPENSSSDLHKKRLDVIRTLMETSQTETSTN
SSAKETVRPVAGDSNHMIRPPSSDNMVSQSNASQMLHEMTRF
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaattccgtcgtcttccccaaaattaactcaaccatcgaaccctataatggat
accacaaaccaagtaaccgccggcggagctgcaccgtcgacgacgtcgtctaatcccgga
attacgatgacttctccttctaacaacaattcaatcgcacaatcgccttcaattgacctc
cctcaaatcccgttagcccaatctcagcaacagcagcatcagcatcaaattcagatgccg
cagcctcaacaaatgcagcagcagcagcaacagcaattgacacaatctcaacaacagcag
cagcagcagcagcaaatgcagctccagcagcaacagagtaattcgagcaatcttaacggc
agtaacagcaacttgatgtccgcctctaatttccagatgcagcaaaacttgcagagatcg
ccctcaatggcggcgaggatgagtcaattgcaaatgcaacagcagcaacaacaatttggt
ttgatgaggcagcaatcaggagggctttatggtcaaatgaattttggggttggaggtact
tcgctccagcaacagcagcaacaacaattgcagcaacagcaattgcagcaacaatttcaa
caacagcaacagcagcagcagcaacagaaccaacaacagcagcaaataggtggtcagatg
ggtagcggaaatttagctagggcagctttaatgggacagactggccatctgcccatgtta
tctggacaagctgctgctgcagcagcggctgttgcccagttcaatttgcaatctcaattt
ttgaattcgccacggcagaaggcaggtctaatgcaggggaatcaattccatacagggaat
tcccatggccagtccttacaggcaatgggaatgatgggatctctcaacatgagctctcag
ctcagggcaaacggtgccctggcatatgcacaaagggtgaatcaaggtcagctgaggcag
cagcagttgtcccagcaaaatcctctcaccactactcagaaaatatcggctcagagtctt
ccaaggacgtcatttgctaactctcagttacctgggttgactcagaatggacaatcggca
attatgcagaataattcttcacagcagcagtggttgaagccaatgcctgcgatttctact
cctaattccccttcctttcgtcttcaacagcagaggcagcaaatgcttctacagcaccaa
aactcaatgggtttgaacccacagcagctatcccaaattgtacaacagcagcaacagatt
gggcacccccagatgcatcaacagcaacagcaacagcaacaacaacagcagctttcacat
cagcagcagtcttccccaaggatggctgctccagctggccaaaaatccctgagtttaact
ggctcacaaccagatgccactggatccggaacaactactccaggggggagttcaagtcag
gggactgaagcaagcaatcagcttcttggaaagagaaagatacaggatttggtttcacag
gtggatgcgcagggaaagcttgatcccgaagttgaagatcttcttctagagattgctgat
gacttcattgattcggttactacatttgcttgcaatttggcgaagcatcggaaatcttca
actttggagtccaaggatgtactgttacatctagagaaaaactggcacttgactattcca
ggcttttcaagtgaagagaggaaacagtatccagaaaattcatcaagtgatctccacaaa
aagcgtttggatgtgatacgtaccttgatggagacctcacaaacagaaacaagtacaaat
agtagtgctaaggaaactgtcagaccagtggcgggtgactcaaatcacatgatcagacct
ccaagttcagacaacatggtttcacagtctaatgcttctcaaatgttgcatgagatgaca
aggttttga
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integrated database retrieval system
