KEGG   Solanum lycopersicum (tomato): 101258184
Entry
101258184         CDS       T02665                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5B
  KO
K14963  COMPASS component SWD3
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    101258184
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sly03036]
    101258184
Chromosome and associated proteins [BR:sly03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     101258184
    NSL complex
     101258184
   HMT complexes
    COMPASS/SET1 complex
     101258184
    COMPASS/SET1 complex (yeast)
     101258184
    MLL-HCF complex
     101258184
    MLL3/MLL4 complex
     101258184
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     101258184
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_WDR41 PAC11 Beta-prop_SCAP DSE1_N CFAP251_N Beta-prop_EIPR1 ASA1 Beta-prop_SPT8 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_DCAF4 WD40_like eIF2A Beta-prop_NOL10_N Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_VPS8 TRM82_WD Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_DCAF12 KNTC1_N Beta-prop_IP5PC_F PROPPIN Beta-prop_LRRK2 Tricorn_2nd SHKBP1_KCTD3_C YNCE
Other DBs
NCBI-GeneID: 101258184
NCBI-ProteinID: XP_004247172
LinkDB
Position
9:60149863..60152347
AA seq 315 aa
MANNNNNQPTTPPYLPYRQRKVLTGHTRAVSCVKFANNGQLFASASLDKTLIVWSTQTLT
QLSRLVGHSEGVSDLSWSSDSSYICSASDDRTLRIWDARTAESVKTLRGHTGFVFCVNFN
PQSNLIVSGSFDETFRVWDVKTGKPIHAIKAHSMPVTSVHFNKDGSLIVSGSHDGSCKIW
DMASGACLKTLIDDKVPAVSFAKFSPNGKFILVATLDNTLKLWNYSTGKFIKSYAGHVNR
VYCITSTFSVTNGKYIVSGSEDQCVYVWDLQGKNLLQKFEGHTDTVISVCCHPIENMILS
AGLDNDRTVRIWVQD
NT seq 948 nt   +upstreamnt  +downstreamnt
atggcgaacaacaacaacaatcaaccgacgactccaccctaccttccctaccgccagaga
aaagttctgaccggacacacacgcgccgtctcttgcgtgaagttcgccaataacggacaa
ctcttcgcttccgcctccttggacaaaaccctaatcgtctggtctacccaaaccctaact
cagctttcacgtctcgtcggccattcagaaggtgtctccgacctatcatggtcgtctgat
tcaagttacatatgctccgcctctgacgatcgcacgcttcgtatttgggatgcacgcaca
gctgagtcagtcaaaactctccggggacatactgggtttgtgttctgcgttaatttcaat
cctcagtccaatctcatagtttcaggttcgtttgatgagacttttcgggtctgggatgtg
aaaacgggcaagccaatccacgcgattaaggcacattcgatgccagttacttcggttcat
ttcaacaaagatggatctttgattgtttcgggtagtcatgatgggtcttgtaagatatgg
gatatggcttccggagcttgcctcaagactcttattgatgataaggttcctgcagtttcc
tttgccaagttttcacctaatggcaagtttattcttgttgccaccctagataatactctt
aagctatggaattattctactggaaaattcataaaaagctacgcaggccatgtgaacaga
gtgtactgcataacttccacgttttcagtcacaaatgggaagtatatagtgagtggctca
gaagatcaatgtgtctacgtatgggatttgcaagggaaaaacttgctgcagaaatttgaa
gggcatactgataccgtcatttcagtgtgttgccaccccatagaaaacatgattctctca
gctggactagataacgacaggacagtgaggatctgggtccaagactaa

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