KEGG   Solanum lycopersicum (tomato): 101258261
Entry
101258261         CDS       T02665                                 
Name
(RefSeq) WD repeat-containing protein 26 homolog isoform X1
  KO
K22382  WD repeat-containing protein 26
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sly04121]
    101258261
Ubiquitin system [BR:sly04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     101258261
   CTLH complex
    101258261
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd EIF3I WDR55 Beta-prop_CAF1B_HIR1 LisH_WDR26 Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT122_1st WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_WDR41 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_NWD2_C TPR1-like_2nd Beta-prop_VPS8 Beta-prop_Vps41 Tricorn_2nd eIF2A zf_topless Beta-prop_SCAP Orbi_VP2
Other DBs
NCBI-GeneID: 101258261
NCBI-ProteinID: XP_004239310
UniProt: A0A3Q7GIC2
LinkDB
Position
5:38667929..38678507
AA seq 580 aa
MGRAEDDEPPPKRVKVSSRKGDLPKSTLLTDPASCSLNDLMAHPLVRQGDDEVVGAKGVV
KKVEFVRIVAEALYSLGYNKAGARLEEESGIPLQSAEVKLFMQQILDGKWDESVATLHKI
GLIDEKIVKLASFEILEQKFFELLDGKNVMDALKTLRTELGPLCVNNDRVRELSLCILSP
LQQVLAGMSGQDVVRPKSRTKLLGELQKLLPPAVIIREQRLVHLVEQALDLQLDACRFHN
SLVGEMSLLTDHQCGRDQIPSQTLQILQDHGDEVWFLQFSHGGKYLASSAADCLVIIWEV
KLDGFFCVKHRFSGHQKPVSNISWSPDDHQLLTCGVEEVVRRWDVESGECIHIYEKNGLG
LISCGWAPDGNRILCGVTDKSISMWDLEGKELECWKGHRTIRISDLGITSDGKHVVSVCK
DNMILLFGWESKAEKVIQEDQTVTSFVLSTDNKYLLVSLWNQEIHLWDIEGTAKLISKYN
GHKRSRFVIRSCFGGLNQEFISSGSEDSQVYIWHISSGELVETLAGHSGTVNCVSWNPAD
PHMLASASDDHTIRIWGLNQVKMEHNDTVSNGVHYCNGGT
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgggacgtgcagaggatgatgaaccaccaccaaaacgtgtgaaggtatcctccagaaag
ggagatcttccaaagagtacacttctgactgatcctgcaagttgctcactgaatgacttg
atggctcaccccctggttcgtcaaggggacgatgaggtcgttggtgcaaaaggggttgtt
aagaaagttgaatttgtgcgaatcgtagcagaggcattatattctcttggttataacaaa
gctggtgcacgtctagaagaagagtctgggattcctttgcaatctgctgaagtaaagtta
tttatgcagcaaatccttgatggtaaatgggatgaaagtgttgccactttacataaaatt
ggtctaatagatgaaaaaattgttaaattggcatcatttgagatattggaacagaagttt
tttgaactgttggatggaaaaaatgtcatggatgctttgaagacattgaggaccgagctt
ggacctctttgcgtaaacaatgatagagtccgtgagctttctttgtgcattctatcacct
ttacagcaggttcttgctgggatgtcaggtcaagatgttgtgcgaccaaagtcacgaaca
aaactcctaggggaattgcagaaattgcttccacccgcggtcataattcgtgaacaaaga
ttggtacatctcgtcgaacaggctcttgacttgcaactagatgcttgtaggtttcacaac
tcgttggtaggtgagatgtctttgcttactgatcatcagtgcggaagagatcaaattcca
tctcaaactttgcagatattacaagatcacggtgatgaagtatggttcttacagttctcc
cacggtggaaaatacttggcctcgtcagctgctgattgtttggtgatcatatgggaggtg
aaattggatggttttttctgtgtgaagcaccggttttctggacaccagaaacctgtctcc
aatatttcatggagtcctgatgaccatcaactccttacttgtggggtagaggaagttgtc
agacgatgggatgttgaatcaggtgaatgtatacatatttatgagaaaaatggtcttggt
ttgatctcgtgtggatgggctcctgatgggaacaggatattatgcggtgttacagacaaa
agcattagcatgtgggatctggaagggaaagagttggagtgttggaaaggccatcggact
attagaatatcagacttggggataactagtgacgggaagcatgtagtctctgtttgtaaa
gataatatgatactattatttggatgggaatcaaaagcagagaaagttattcaggaggat
caaacagtaacatcatttgtactgtccacagacaataagtatttattggttagcctttgg
aatcaagaaattcatctgtgggatatagagggaactgcaaaactcatatccaaatataat
gggcataaacgttcacgcttcgtcataagatcttgctttggcggactgaatcaagaattt
atttctagtggaagtgaggactcccaggtttatatatggcacataagctcaggagaactt
gttgagacgttggcgggacattctggaacagtaaactgtgttagctggaatccagcagat
cctcatatgttggcttctgctagtgatgatcatacaattcgcatatggggtttgaatcaa
gtaaaaatggaacacaatgacacagttagtaatggtgtacactactgcaatgggggaact
tag

DBGET integrated database retrieval system