Solanum lycopersicum (tomato): 101258318
Help
Entry
101258318 CDS
T02665
Symbol
RFP1
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101258318 (RFP1)
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101258318 (RFP1)
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101258318 (RFP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
101258318
NCBI-ProteinID:
NP_001266128
UniProt:
K4BDE8
LinkDB
All DBs
Position
2:70697498..70701831
Genome browser
AA seq
492 aa
AA seq
DB search
MGGKSSREDSWRQASSTRSSSWNQYDYPQTAYPQDSYSYSQQTAVPSYAPPPPSQQNYPP
QHQHNYSSQPQQNYASHEHESRTHTHAPRPRLDRRYSRIADNYNSLDEVTEALARAGLES
SNLIVGIDFTKSNEWTGKRSFSNRSLHHIGQNLNPYEQAISIIGKTLAAFDEDNLIPCFG
FGDASTHDQDVFSFFPNERFCNGFEEVLSRYREIVPQLKLAGPTSFAPVIEMAMTIVEQS
GGQYHVLLIIADGQVTRSVDTGRGQLSPQEQKTVDAIVQASKFPLSIILVGVGDGPWDMM
KEFDDNIPARDFDNFQFVNFTDIMAKNVPQSRKETEFALSALMEIPSQYKATMELNLLGG
QSGKSVNRVALPPPMYGASSVGGSKTSHAPSFQQPASSYYGYGSPADAEPHFQPTSSSYY
DSARPVDNAPSAPSSPYTAPSSTYDNQVCPICLTNPKDMAFGCGHQTCCECGRALENCPI
CRSSIQTRIKLY
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcaagagttcaagagaggatagttggaggcaagcttcatcgactcgatcttcc
tcttggaatcaatacgattatcctcaaactgcttatcctcaagatagttacagttactca
cagcagacggctgttccttcttatgcaccaccaccaccatcccaacagaattatccccca
cagcaccaacacaattattcttcacaaccccaacagaattatgcttctcatgaacatgaa
tctcggactcatactcatgctccacgaccaaggcttgatcggagatactcgaggattgca
gacaattataattccctggatgaggtgactgaagcccttgcacgagctggtttggagtct
tcgaatcttattgtgggtattgatttcaccaagagtaatgaatggacaggtaagaggtct
tttagtaatcggagtctacatcacattgggcagaatttgaacccatatgagcaagccatt
tccataattggaaaaaccttagcggcatttgatgaggataacttgattccttgttttgga
ttcggagatgcatcaactcatgatcaagatgtattcagtttctttcccaatgaaagattt
tgtaatggttttgaggaagttctgtctcgttacagagaaattgtcccccagctgaagctt
gcaggaccaacatcattcgccccggtcattgaaatggccatgacaatagttgagcagagt
ggaggccagtaccatgttctattaatcattgcagatgggcaggtaactagaagtgttgat
actggccgtggacaattaagtccgcaggagcagaaaacggtggatgcaatcgtacaagca
agcaagtttcccttgtcaattatactggttggggttggcgatggaccgtgggatatgatg
aaggaatttgatgataatattcctgctagggacttcgataatttccagttcgtcaatttc
acggacataatggccaaaaatgtgcctcaatctcgaaaggagacggagtttgcgctttca
gcattgatggaaatcccttcacaatacaaagcgacgatggaacttaacttactgggtgga
caaagtggaaaatctgtcaatagggtagctcttcctcctcctatgtatggggcaagttct
gtcggtggttcaaagacctcacatgcaccaagttttcagcagcctgcaagctcgtattat
ggttatggaagccctgcagatgcagaaccacattttcagccgacttcaagttcttactac
gacagtgctcgcccagttgacaatgctccatctgctccgagttcgccctacactgctccc
agttctacctatgacaatcaggtttgccccatttgtcttactaacccaaaagacatggcc
tttggctgtgggcatcagacatgttgtgagtgtgggagagcgcttgagaattgcccaata
tgtcgaagttcaattcaaaccagaataaagctctattga
DBGET
integrated database retrieval system
