KEGG   Solanum lycopersicum (tomato): 101258340
Entry
101258340         CDS       T02665                                 
Name
(RefSeq) target of rapamycin complex subunit LST8-1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly04136  Autophagy - other
sly04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:sly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    101258340
   04136 Autophagy - other
    101258340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sly04131]
    101258340
Membrane trafficking [BR:sly04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    101258340
   mTORC2 complex
    101258340
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 DSE1_N Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_NOL10_N WDR90_beta-prop_4th Beta-prop_WDR41 ANAPC4_WD40 CFAP251_N ASA1 Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_IFT140_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_Vps41 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_IFT140_2nd Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_IP5PC_F Beta-prop_SPT8 PAC11 Beta-prop_WDR35_TULP_N DmsR_N
Other DBs
NCBI-GeneID: 101258340
NCBI-ProteinID: XP_004234794
UniProt: A0A3Q7G7N7
LinkDB
Position
3:26598495..26610200
AA seq 315 aa
MSQPSVVLATASYDHTIKFWEAKSARCYRTIQYPESQVNRLEITPDKRFLAAAGNPHIRL
FDINSNSPQPLRSFDSHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRA
AVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGSLIVAA
NNRGTCYVWRLLRGTETMTNFEPLHKLQAHDGYILKCLLSPELCEPNRYLATASSDHTVK
IWNVDGFTLEKTLIGHERWVWDCVFSVDGAFLITASSDTTTRLWSTSTGKDIKVYQGHHK
ATVCCALHDGPEPSS
NT seq 948 nt   +upstreamnt  +downstreamnt
atgagtcaaccatcagtggtgctagcaacggctagctatgatcacactataaaattttgg
gaggctaagagtgcccgctgctatcgaactattcaatacccggaatcacaagttaatcgt
cttgaaattactccggataaacgcttcttggctgctgctggaaatcctcacattcgatta
tttgacatcaactcgaacagtcctcagccactgaggagctttgattcacacactaataat
gtgatggcagtaggatttcagtgcgatggtaactggatgtattctggatctgaagatggc
actgtaaagatttgggatttgagagcaccaggttgtcagagggaatatgaaagtcgggca
gctgtgaacactgtagttttgcaccctaatcagactgagttgatatctggagaccaaaat
ggcaatatccgtgtgtgggatttgagagcaaattcatgtagctgtgagttggtaccggag
gtggatacagctgttcgttctttgactgtcatgtgggatggaagcttaattgttgctgca
aacaatcgtggaacatgttatgtttggcgtttactacgtggcactgagacaatgaccaac
tttgagcctctgcataagttacaggctcatgatggttatatcctcaaatgtcttctttcc
cctgaactatgcgaacctaacaggtatctggcgactgcatcttctgatcatacagtcaag
atttggaatgtggatggctttaccttggagaaaactctgataggacacgaacgctgggtt
tgggactgtgtgttctctgtagatggtgcttttctcatcacagcatcttctgatacaaca
acaagattgtggtccacatctacaggcaaagatatcaaagtgtaccaggggcatcataaa
gcaacagtatgttgtgctctacatgacggacctgaaccatctagctga

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